Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0303 ATGCCACGAGGCAGGCCATCAGGCTCCAAGAATAAGCCCAAGACCACTTCCCTCCTAGTGGCCCAACCCGTTGAGCCCTCCATGAAGCTTGTCATCATCAACGTTGACCGAGGTAAGGACATCATGCAAACTATTCTTAATGTCGCTCACCAGGGTTGCGTCAGCCTCACTGTCCTCAGCGCCTCTGGCACAGTCACTAGTGTGACTCTTTGCAACTCACCCAACGATGGCGGTGGTGCCCTCATGCTCCATGGGCCTTTCACCTTACTCTCCATCAATGGCTCATACTTCTACAACAACAACCAATACAATCTTCACTCTGGAGCAACCCGTTCCCCTCCTGTATCCTTCGGGATCCACCTCTCCACCTCTAAGGGCAAGATCCTTGGCGGTGCAATTGGCGGCAATGTCATCGCCGGTGACGATGTCAGCATCACACTCTCCACCTTCAGCCACCCTGAGATTTACATGTACGTTCCTAAGGATGAGGAAGAAGACAATGATGAAAAAAAACAATAA 519 0.5145 MPRGRPSGSKNKPKTTSLLVAQPVEPSMKLVIINVDRGKDIMQTILNVAHQGCVSLTVLSASGTVTSVTLCNSPNDGGGALMLHGPFTLLSINGSYFYNNNQYNLHSGATRSPPVSFGIHLSTSKGKILGGAIGGNVIAGDDVSITLSTFSHPEIYMYVPKDEEEDNDEKKQ* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0303 172 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 2 168 - -
Gso20g0303 172 SUPERFAMILY AF0104/ALDC/Ptd012-like 27 153 - -
Gso20g0303 172 CDD DUF296 32 140 IPR005175 -
Gso20g0303 172 Pfam Plants and Prokaryotes Conserved (PCC) domain 31 151 IPR005175 -
Gso20g0303 172 Gene3D - 27 166 - -
Gso20g0303 172 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 168 IPR014476 GO:0003680
Gso20g0303 172 ProSiteProfiles PPC domain profile profile. 25 172 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0303 Gso-Chr20 6407723 6408241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0303 2 167 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.911 6.34e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0303 - - gmx:102669197 323.553