Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0302 ATGACCAACAATTCCATGGCAATCTCCAACTCCCAAAACTCTGTTTCCTTCGACTTAGACTTGACATCCTCCTGGCTCAACCAAACTAGCTCCTGCTCCCAGCGCCCTCATTGTCCACCATCACCAGCTACAAACCAACCCCTAGAGAATCTCCCTCTTACAAACCTACCCACCAAGAAGCCACGTGGCAGGCCCGCAGGCTCCAAGAACAAGCCCAAGACCACCCCCTTCCTGGTGGCCCAACCTGTGGAACCCTACATGAAGGTCATCATTGTCAATGTGACCCCAAGCAGCGATATCATTGAGTCCATTCTTGATGTTGCTCATCAAGGCCACGTTAGCCTCACTGTCCTCGGTGCCTCTGGAACGATCACCGGAGTAACCCTCAACAACTTTTCGCATGGTGTTGATGCCCTCACACTTCGCGGGCCCTTCACCTTGCTCTCCCTCAATGGCTCCTACTTATACAACAACCACTATGCCCTTCACCCTGGAGCCACCCCTGCCCCTCCCTTATCCTTTGGTATCAGCTTTTCCACCTCTCAAGGGCAAGTCTTTGGCGGTGCCATTGGCGGTAGAGTCATTGCCAGTAATGATGTCAGCCTTACAATTTGCACCTTCAAGAATCCTGTGATGCATAAGTACGCTTCTAGAGACAAAGAAAGGGACATGGGTGACAATAATAACAACAACAATTATAACAATAACTAA 711 0.5021 MTNNSMAISNSQNSVSFDLDLTSSWLNQTSSCSQRPHCPPSPATNQPLENLPLTNLPTKKPRGRPAGSKNKPKTTPFLVAQPVEPYMKVIIVNVTPSSDIIESILDVAHQGHVSLTVLGASGTITGVTLNNFSHGVDALTLRGPFTLLSLNGSYLYNNHYALHPGATPAPPLSFGISFSTSQGQVFGGAIGGRVIASNDVSLTICTFKNPVMHKYASRDKERDMGDNNNNNNYNNN* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0302 236 MobiDBLite consensus disorder prediction 29 75 - -
Gso20g0302 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 234 IPR014476 GO:0003680
Gso20g0302 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 33 234 - -
Gso20g0302 236 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 208 IPR005175 -
Gso20g0302 236 ProSiteProfiles PPC domain profile profile. 84 230 IPR005175 -
Gso20g0302 236 CDD DUF296 88 207 IPR005175 -
Gso20g0302 236 Gene3D - 86 229 - -
Gso20g0302 236 MobiDBLite consensus disorder prediction 217 236 - -
Gso20g0302 236 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0302 Gso-Chr20 6359738 6360448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0302 59 222 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 32.143 3.31e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0302 - - gmx:102659818 442.58