Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0295 ATGGAAGTAACCCTCCATAACTCTTCGCATGGTGCTGGTGCCCTCCCACTTTGCGGGCCCTTCACCTTGCTCTCCCTGAACGGCTCCTACTTATACAACAACCACTACACCCTTCATCCTGGAGCCACCCTTGTCCCTCCCTTATCCTTTGGGATTAGCTTTTCCACCTCTCAAGGGCAAGTCTTTGGCGGTGCCATTGGCGGTAGAGTCATTGCCGGTAATGATGTCAGCCTTTCAATTTGCACCTTCAAGAACCCTGTGATGTACAAGTATGCCTCTAGAGACAAAGAAAAGAATGAGGGTAACAATAATAACAACAACAATTATAACAATAACTCTAAAGATTTTATTGGAAGTAGTGAGTTGTTGGGGTTCAACATGATTAGTTGTGGAGTCCGTGGGTGGTGA 408 0.4632 MEVTLHNSSHGAGALPLCGPFTLLSLNGSYLYNNHYTLHPGATLVPPLSFGISFSTSQGQVFGGAIGGRVIAGNDVSLSICTFKNPVMYKYASRDKEKNEGNNNNNNNYNNNSKDFIGSSELLGFNMISCGVRGW* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0295 135 ProSiteProfiles PPC domain profile profile. 1 106 IPR005175 -
Gso20g0295 135 Pfam Plants and Prokaryotes Conserved (PCC) domain 18 84 IPR005175 -
Gso20g0295 135 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 109 IPR014476 GO:0003680
Gso20g0295 135 SUPERFAMILY AF0104/ALDC/Ptd012-like 14 94 - -
Gso20g0295 135 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 2 109 - -
Gso20g0295 135 Gene3D - 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0295 Gso-Chr20 6004337 6004744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0295 3 130 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 28.571 1.51e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0295 - - gmx:102662371 252.677