Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0293 ATGTGTTTTTCCACCGATGTTGAAACTGCCTTTTCTAGTAGTGAAACCAAAATAGAAGGGACTAAGGATGGTGATTTACTTGTTTGCATTCAATGTGAACATAAATATCATGTTGGATGCTTGAAATATAGAGAAAAATCTGAGTCACGAAGATATATGAAAAATTGGTTGTGTGGAAAAGAGTGTGAACGGATATATGAAGGACTCCAAAGTCTATTAGGAAAGCCACTTATAGTGGGTGCGAACAATCTAACATGGACATCGGTGAAGTTTATCAACTCTGAAAGTTGTGATGTTGGTAGTACTAAGAATGACTTATTGGCAGAGAAATACTGCAAACTCAGTGTTGCACTTTTGGTGATTTCACAATTTACAGCTCACACAACTCGGAGTGGAGAGGCTAGTCTTGCTTGCTGTTTCTGGTGTGCTAGAAACATGGACCAATTCTTTTGGTTTTGCAAAGATGACAAATTTTGA 477 0.3753 MCFSTDVETAFSSSETKIEGTKDGDLLVCIQCEHKYHVGCLKYREKSESRRYMKNWLCGKECERIYEGLQSLLGKPLIVGANNLTWTSVKFINSESCDVGSTKNDLLAEKYCKLSVALLVISQFTAHTTRSGEASLACCFWCARNMDQFFWFCKDDKF* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0293 158 PANTHER PHD ZINC FINGER PROTEIN 14 121 - -
Gso20g0293 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 65 IPR013083 -
Gso20g0293 158 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 14 121 - -
Gso20g0293 158 SUPERFAMILY FYVE/PHD zinc finger 22 64 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0293 Gso-Chr20 5974744 5976455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0293 21 131 PHD Transcription Factor Family AT5G58610 34.513 6.34e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0293 - - gsj:114401813 337.035