Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0290 ATGGATTCCTCCTCCCAACGCTTTCCACCACCAACACTCGCCACTGCCAATCTGCCTCTCTTGGCCCCACCTACCAAGAATGCATGTGGTAGGCCCTGCGGCTCAAAGAACAAGCCTAAGTCTACCTCCCTCTCAGGTCAACCAGTTAAGCCCTCTGTGAAGCTTGTCACCATCAACATTGTTCCACGTATGGATGTCATGGAGACCATCCTTGACGTTGCTCGTCGTGACCATGTTAGCGTCGTCATTCTCAATGCATTTGGCACGATAAAAAATGCGACTGTTTGTGACTCACCACAAGGTGTCCCTACCTTGCTCATTGGACCCTTCTCCATGCTCTCCTTCACTGGCTACTACTTATACAATAACCAGTATGCCCTTCACCCAGGAGCCACCCCTCCCCCTCTGTTTTCCTTTGGGATCAAACTATGCATATCTCATGGGCAGGTCTTCAACGGACTTATTGGCGGCAGCGTCATTGCCGGTGATAATGTCAGCCTCATGGTCTCCACCTTCAGAGAACCAAATATTAGCAAATTTATTCCCGAAGGAAAAGAAGGGAACAACAATGACAACAATGCATAA 585 0.4906 MDSSSQRFPPPTLATANLPLLAPPTKNACGRPCGSKNKPKSTSLSGQPVKPSVKLVTINIVPRMDVMETILDVARRDHVSVVILNAFGTIKNATVCDSPQGVPTLLIGPFSMLSFTGYYLYNNQYALHPGATPPPLFSFGIKLCISHGQVFNGLIGGSVIAGDNVSLMVSTFREPNISKFIPEGKEGNNNDNNA* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0290 194 Gene3D - 54 186 - -
Gso20g0290 194 MobiDBLite consensus disorder prediction 1 48 - -
Gso20g0290 194 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 188 - -
Gso20g0290 194 Pfam Plants and Prokaryotes Conserved (PCC) domain 56 173 IPR005175 -
Gso20g0290 194 ProSiteProfiles PPC domain profile profile. 49 193 IPR005175 -
Gso20g0290 194 SUPERFAMILY AF0104/ALDC/Ptd012-like 54 180 - -
Gso20g0290 194 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 19 188 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0290 Gso-Chr20 5933870 5934454 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0290 30 172 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 30.769 1.44e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0290 - - gmx:102662006 338.961