Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0278 ATGGAGAGCCAAAGCCAACTTGAAGTTTCAAATTCTGAGCAGGGAACCACCTTCATCAAAACTTGTTTCAATGGTATCAACACTTTGACAGGTATTGGAATACTCTCAATACCATATGCAGTTTCTCAAGGAGGGTGGTTGAGTTTCATTCTGCTAATTGTTTTTGCAATGATGTTTTGGTACACGGGGTTACTTCTACAGAGGTGTATGAACAAGCATCCACTAATCAAATCTTACCCTGACATAGGTGAGGTTGCATTTGGGCTAAGAGGAAGAGCTATGATCTCTACATTCATATACATAGAATTGTTTTTAGTGGCCGTTGAGCTTCTGATATTGGAAGGCGACAATCTAGAAAAATTGTTTCCTCATATGAACTTCAAAATTGGTAGCCTTAGAATTGAAGGTAAAAGTGGTTTTGTGGTGCTAGCTGCTTTGGTCATACTACCAACAACATGGTTGAGAAGTTTGGGAGCTTTGGCTTATGTTTCTCTTGGTGGGGTAATGGTTTCTATTGTTTTGATTGGTTGTGTTGTGTGGGTGGGTGAAGTTGATGGTGTTGGGTTTCATGAAAGTGGCCAATTAGTAAATTGGGAGGGATTGACTACTGCTGTGAGCCTTTTTGCATTCTGTTACTGTGCACATGGAGTGATGCCCACATTGATAAACTCTATGAACGATAGAAGCCAGTTTGGCAAGGTTTTGATTGTTTGCTTTGTAGCAAGCACTATTATCTATGGAACCATTGCTGTTTTAGGCTACGCAATGTTTGGAGATTATTTGATGTCTCAAATAACCTTAAATCTACCATCAAAGAAAATAAGTACTAAATTAGCTATTTATAGCACAATAATCAATCCTTTCACTAAGTATGCTGTACTAATCACCCCAATAGCTAATGCTATTGAGGAAAAATGGCTTCTCTGCAAAAGAAAGCCTATTGCCATTTTGGTTAGAACAACCATTTTGGTCAGCACCGTGCTTATGGCACTATTCATGCCGTTTTTCGGTTATGTTATGGCATTTATTGGTGCATTTTTTAGCGTGACAATCTCATTGTTGTTCCCTTGCATCTGTTACTTGAAGATGAACAAAGCTGCTCGGCAATTTGGGTTGGAGTTGATCATCATAATTGTAATTCTCTTCGTAGGTATATTCATTGGAATATTGGGTACCTATCTTTCTGTGAGACACATAGTGAATCATATGAAGTTGTGTTCTTAA 1224 0.384 MESQSQLEVSNSEQGTTFIKTCFNGINTLTGIGILSIPYAVSQGGWLSFILLIVFAMMFWYTGLLLQRCMNKHPLIKSYPDIGEVAFGLRGRAMISTFIYIELFLVAVELLILEGDNLEKLFPHMNFKIGSLRIEGKSGFVVLAALVILPTTWLRSLGALAYVSLGGVMVSIVLIGCVVWVGEVDGVGFHESGQLVNWEGLTTAVSLFAFCYCAHGVMPTLINSMNDRSQFGKVLIVCFVASTIIYGTIAVLGYAMFGDYLMSQITLNLPSKKISTKLAIYSTIINPFTKYAVLITPIANAIEEKWLLCKRKPIAILVRTTILVSTVLMALFMPFFGYVMAFIGAFFSVTISLLFPCICYLKMNKAARQFGLELIIIIVILFVGIFIGILGTYLSVRHIVNHMKLCS* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0278 407 PANTHER OS06G0228500 PROTEIN 12 401 - -
Gso20g0278 407 PANTHER OS05G0424000 PROTEIN-RELATED 12 401 - -
Gso20g0278 407 Pfam Transmembrane amino acid transporter protein 15 393 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0278 Gso-Chr20 5145249 5148809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0278 1 400 Amino Acid or Auxin Permease AAAP Family AT3G28960 46.898 1.86e-137 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0278 K15015 - gmx:100812006 783.867