Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0274 ATGGAAAACTTTTTTGTGCCATTTTTAAAAAAAAACCCCAACCCATCAATCACCACTACTGGTGGCAGTGGCTCATCTTCATCAAACCAAACAAGCCTTGTACAACCAAGCACATATCCTCAAAATTTCCCTTACAATACTAGTGAAAAACTTAACTTTCCAGAACAACCTTATTTCATTCCTTTGTATCCCTTTCCAACAGGACAAGTTAGCTTTTCTAATCAACCCTATGGAATGCCAAATTCGGAACTTCAAGGTTCGAGGGCATGCATGACCAAAGCTACAAGGGAGAGATGGAGACAAGTAAGACAAAGGAGTAAAAATTCTACTCCTGTCGCTCCTAATTCAGTTCTAGAAAGGACAACAAGGGAACAATTTGTTCCTAATGGAGGGTCAAATGTGAGGATCACAGTCAAACAACACAATGCAACCAAGTTTTTTAACACCCCAAACGGGAAGAAGCTAGAAGAAATTTTGACAAAGAAGTTGAATAATAGTGATGTTGGCGTCCTAGGCCGCATTGTGCTCCCAAAGAGAGAGGCTGAGGATAAGCTTCCGACACTGTGGAAGAAGGAAGGAATCAATATTGTACTAAAGGATGTATATTCTGAGATTGAATGGAGCATCAAATACAAGTAA 639 0.3975 MENFFVPFLKKNPNPSITTTGGSGSSSSNQTSLVQPSTYPQNFPYNTSEKLNFPEQPYFIPLYPFPTGQVSFSNQPYGMPNSELQGSRACMTKATRERWRQVRQRSKNSTPVAPNSVLERTTREQFVPNGGSNVRITVKQHNATKFFNTPNGKKLEEILTKKLNNSDVGVLGRIVLPKREAEDKLPTLWKKEGINIVLKDVYSEIEWSIKYK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0274 212 PANTHER B3 DNA-BINDING DOMAIN PROTEIN 1 212 - -
Gso20g0274 212 MobiDBLite consensus disorder prediction 11 36 - -
Gso20g0274 212 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 212 IPR044800 GO:0003700
Gso20g0274 212 MobiDBLite consensus disorder prediction 12 36 - -
Gso20g0274 212 Gene3D - 147 212 IPR015300 -
Gso20g0274 212 CDD B3_DNA 158 212 IPR003340 GO:0003677
Gso20g0274 212 SUPERFAMILY DNA-binding pseudobarrel domain 158 212 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0274 Gso-Chr20 4998763 5000369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0274 118 212 B3 DNA Binding Superfamily AT1G28300 46.316 9.19e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0274 - - gsj:114401800 417.542