Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0257 ATGACAAGTGAAAAGCTGGCTGGACCAAATCTGAACTCTTTATGTGGATTTGAGGTCATAGATAAGATAAAGTATTTGGTTAAAGAAGAATGTCCTATTACTGTTTCATGTGTTGACATCCTTGCCATGGCTGCACGTGATGTTGTTGAATTGAGAGGAGGACCAAGATGGGATGCCTTGCTTGGAAGGAAGGATGCTCTCGAGTCAAGTTTCAGTGGAGCTAACATATTAATTCCTGCTCCAAATTCATCTTTGGAGGTTCTCATAGATAATTTCAAGCAACAAGGCCTCGACATAGAATACTTGGTAACTCTATCTGGTAGCCATACTATAGGAAGAGCAAGATGTCTAAGCTTCAGGCAAAGGATATATGATGCAAAAGAGGAATATCATTATGGCTATGATCACTACAAACGATACACAAGTTTTAGGACAATCCTGCAGTCCATATGCCCTGTTGAGGGAAGGGACAATAAATTTGCACCCTTGGATTTTCAAACCCCAAAAAGATTTCACAATCACTACTTCATAAACATTCTTGAAGGGAAAGGCTTGTTAGGTTCTGACAATGTTCTTATCAGCCATGACTTAGATGGAAAGACTACAGAGCAGGTGTGGGCTTATGCCTCTAATGAAAAACTTTTGATTAAGATGGGAAACATCAATGTTCTTACAGGAAATGAGGGGGAAATTAGGAGGAATTGTAGGTTTGTCGATGCTTAG 723 0.397 MTSEKLAGPNLNSLCGFEVIDKIKYLVKEECPITVSCVDILAMAARDVVELRGGPRWDALLGRKDALESSFSGANILIPAPNSSLEVLIDNFKQQGLDIEYLVTLSGSHTIGRARCLSFRQRIYDAKEEYHYGYDHYKRYTSFRTILQSICPVEGRDNKFAPLDFQTPKRFHNHYFINILEGKGLLGSDNVLISHDLDGKTTEQVWAYASNEKLLIKMGNINVLTGNEGEIRRNCRFVDA* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0257 240 PRINTS Haem peroxidase superfamily signature 35 52 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 PRINTS Haem peroxidase superfamily signature 53 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 PRINTS Haem peroxidase superfamily signature 101 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 PRINTS Haem peroxidase superfamily signature 164 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 ProSiteProfiles Plant heme peroxidase family profile. 1 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 PANTHER PEROXIDASE 20 1 239 - -
Gso20g0257 240 Gene3D Peroxidase, domain 2 79 218 - -
Gso20g0257 240 SUPERFAMILY Heme-dependent peroxidases 2 238 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 PANTHER PEROXIDASE 72-RELATED 1 239 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 Gene3D - 3 238 - -
Gso20g0257 240 Pfam Peroxidase 2 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 PRINTS Plant peroxidase signature 15 28 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 PRINTS Plant peroxidase signature 34 44 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 PRINTS Plant peroxidase signature 53 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 PRINTS Plant peroxidase signature 100 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 PRINTS Plant peroxidase signature 162 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso20g0257 240 PRINTS Plant peroxidase signature 178 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0257 Gso-Chr20 4554685 4557120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0257 1 239 Peroxidase AT2G35380 61.134 5.55e-109 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0257 K00430 - gmx:106797731 478.018