Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0255 ATGATTTACACGAAAGAGATGAAGGAGAGGTTAAGTGGACAGGACAACCGCTATGCATTTATGAACCTTATTTTGAAGGATTCTGGTCTTTTCCACATCAAAAATCTCTTTATCGAGGAATTGGCCTGGATTGAACGTTTACACAAAAATGCTTGGATTGGATTTCAGTCTTGGAGAGCAACAACAAGGAAGCTTATGGTGGTCTTGCACGTGGCCTTCATGAAGGTGCAAAAGGGATCGAGAAGCATGTTGTGCAACTATGTTCTAGCAGAAGACTGTGACCAACCTGACTATGTTAAATTGGCTAAGGCCATTTGTGTAGAGCACAATGTTAGCCTACTGACAATTCTGGGTGCAAAGACCCTTGGAAAATGGGCTGGTTTGTGCAAGATTGATTCGGAAGGAAAAGCTAGGAAGGTTACTGGTTGCTTCTGCAGTTGTGCAGCATTGACAGCAAGCTTGCATCAGTTGAGGCTCGGGTTCTTCTTGCTCCATGGTTGA 501 0.4371 MIYTKEMKERLSGQDNRYAFMNLILKDSGLFHIKNLFIEELAWIERLHKNAWIGFQSWRATTRKLMVVLHVAFMKVQKGSRSMLCNYVLAEDCDQPDYVKLAKAICVEHNVSLLTILGAKTLGKWAGLCKIDSEGKARKVTGCFCSCAALTASLHQLRLGFFLLHG* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0255 166 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 88 147 IPR004038 -
Gso20g0255 166 Gene3D - 59 158 IPR029064 -
Gso20g0255 166 PANTHER 40S RIBOSOMAL PROTEIN S12 63 164 IPR000530 GO:0003735|GO:0005840|GO:0006412
Gso20g0255 166 PANTHER 40S RIBOSOMAL PROTEIN S12 63 164 - -
Gso20g0255 166 SUPERFAMILY L30e-like 88 146 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0255 Gso-Chr20 4463840 4469914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0255 69 145 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 62.338 8.69e-28 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0255 K02951 - gmx:100800815 341.658