Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0203 ATGTCCACAGAGAAGGAGAGAGAGACCCAAGTTTACTTGGCCAAGCTCTCTGAGCAAGCCGAGAGATATGAAGAGATGGTTGAATGCATGAAGACAATTGCAAAACTTGATCTAGAACTAACTGTTGAAGAGAGGAACCTGCTCTCAGTGGGATATAAGAATGTGATTGGTGCAAGAAGAGCCTCTTGGCGCATTATGTCATCAATTGAACAAAAGGAAGAGTCTAAAGGAAATGAAAGCAATGCAAAACTGATAAAGAATTATCGTCAAAAGGTTGAAGAGGAACTCTCAAAGATTTGCAGTGACATTCTCAGCATTATTGACCAGCATCTTGTTCCTTCTTCCACCTCAGGAGAAGCCACCGTTTTCTACTATAAGATGAAAGGTGACTATTATCGATATTTAGCCGAGTTCAAGACCGATCAGGATAGAAAGGAGGCTGCTGAGCAATCACTAAAGGGATATGAGGCTGCTTTAGCTACAGCAAGCACAGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCGCTCAACTTCTCAGTCTTCTATTATGAGATACTGAACTCTCCTGAAAGGGCCTGTCATTTGGCTAAGCAAGCTTTCGATGAGGCAATTGCAGAGTTAGACACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGCTGCTGAGAGACAATCTCACTCTCTGGACCTCTGATTTACCTGAGGATGGAGGTGACGAAATTAAAACAGAAGAAGCCAAACCTGCTGAAACTTCTGAGCACTCATAG 783 0.4304 MSTEKERETQVYLAKLSEQAERYEEMVECMKTIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNAKLIKNYRQKVEEELSKICSDILSIIDQHLVPSSTSGEATVFYYKMKGDYYRYLAEFKTDQDRKEAAEQSLKGYEAALATASTDLPSTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDEIKTEEAKPAETSEHS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0203 260 Coils Coil 13 33 - -
Gso20g0203 260 MobiDBLite consensus disorder prediction 240 260 - -
Gso20g0203 260 Pfam 14-3-3 protein 13 235 IPR023410 -
Gso20g0203 260 Coils Coil 195 215 - -
Gso20g0203 260 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Gso20g0203 260 PIRSF 14-3-3 1 247 IPR000308 -
Gso20g0203 260 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Gso20g0203 260 PANTHER BNAC03G57490D PROTEIN 3 250 - -
Gso20g0203 260 SMART 1433_4 7 248 IPR023410 -
Gso20g0203 260 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Gso20g0203 260 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Gso20g0203 260 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Gso20g0203 260 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Gso20g0203 260 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Gso20g0203 260 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Gso20g0203 260 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Gso20g0203 260 Gene3D - 1 247 IPR036815 -
Gso20g0203 260 PANTHER 14-3-3 PROTEIN 3 250 IPR000308 -
Gso20g0203 260 Coils Coil 145 165 - -
Gso20g0203 260 MobiDBLite consensus disorder prediction 238 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0203 Gso-Chr20 2879298 2886455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0203 2 259 14-3-3 family AT1G26480 84.091 3.03e-165 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0203 - K06630 gmx:100798385 504.597