Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0191 ATGAAGCTGCTGCGTCTTCGAATCCTCCTCATTGCTCTGCTTCTCATGTTGTGCGCCCCATTTTCATCTTCTTCCAAACCCAAAGACCCCTTCCTCGGCGTCGCCCCCGAAGATGACGACTATTACAAGTCTTCCGATGTAATAAGGTGTAAAGATGGATCCGGAAAATTCACCAAGGCTCAGTTCAATGATGATTTCTGCGATTGTGCTGATGGCACCGATGAACCTGGTACATCGGCATGTCCTGGTGGAAAATTCTATTGTCGGAATGCAGGACATTCTCCTGTTTACTTGTTTTCATCTAGAGTGAACGACGGAATTTGTGATTGCTGTGATGGAACCGATGAATACGATGGTCAAGTAAAGTGTCCAAATACCTGCTGGGAGGCTGGTAAAGTTGCTAGAGACAGACTGAAAAAAAAGATTGCCACTTATCAAGAGGGTGTCAAATTGCGAAAGCAAGAAATTGAACAAGCTAAAGTAGCTATGGAGAAGGATGAGGCCGAACTTTCAAAATTAAAAAAGGAAGAAAGTATACTTAAAGGGATCGTGAAACAGCTAAAGGATCATAAAGAACAAATAGATAAGGCAGAGGAGGAGGAGCGTTTACAGAAAGAAAAAGAAGAGAAGCAGAAAAGGGAGTCTGAGGAGAAGGCTAATGAAGCAAAAGATAAAGCTGATGAAGATACAGAGCATAGAAATGAAGCTGAAAAGCATTCAGATATTGAAGACAATACTCTAGAAAATAACCATGATAAAATAGAAAATCTAGAGGGTTCTCCTGCGGATCAGGATGAAGCAGGGGACAAATTAGCAGATGTACTTGATGATGATGATGATGATGATGATGATGATGAAGCCAGTGATAGTCATGGGAGTGAAGGATCTTTGCATAATAAAGTGGAAGAGAATGCAAAAGAAGCTGAGGAAGAACCTATTGTTAAATCTGAAACTGATATAAAGGTCAGAAACAAAGAGTCTTCTGATGAAATCATCAATAAGGGGAATGATGCATCTGAAAATACTGAGGGATTATCAAGGGAAGAATTGGGCCGGCTTGTTGCTTCACGTTGGACAGGAGAAAATACTGATAAGCCAAGTGCTGAACCTGATACAACATTAGACAATGAAGATCGGGAAGATCCAAAGGGGAAAAATAATGAGGAATATGAAGGCTATGCTTCTGAAACTGATGATGACAACAACAAATATGATGATGACAGCCACAAATACGACGATGAAGATGAAGTTGATGATGAATATCGAGAGGATGAGCATGATGACCTTTCTTCCTCCTACAAATCTGATTCTGATAATGAACCAGACTTGTCAGATAATCCTTCTTGGTTAGAGAAAATACAGAGAACTGTACGCAATATTTTTCAGGTTGTTAATTTATTCCAGGCTCCAGTGAACCAGACAGATGCTGCTCGTGTACGCAAGGAATATGATGAATCAAGTGCCAAGTTGTCGAAAATACAGTCTAGAATATCAAGTCTGAAGCAAAAGCTAAAACATGATTTTGGTCCAGCAAAGGAGTTTTATTCATTCTATGATCATTGCTTTGAGGGCAAGGAGAACAAGTACACTTACAAAGTCTGCCCCTATAAGCAGGCTTCTCAGGAGGAGGGTTATTCCAATACCCGTTTGGGGAGCTGGGACAAATTTGAGGATTCGTACAGAGTAATGGTGTTTTCTAATGGTGATAAATGCTGGAATGGTCCAGATAGGAGTTTGAAGGTCAAGTTAAGATGCGGGTTGAAAAACGAGATTACTGATGTAGATGAACCAAGCCGTTGCGAATATGTAGCTGTATTATCTACCCCGACCCTTTGCCAAGAGGAAAGGCTGAAGGAGTTACAACTCAAACTAGACCTTTTGAATTCGGAAATACCAGCAAACCATGACGAGTTGTGA 1917 0.4079 MKLLRLRILLIALLLMLCAPFSSSSKPKDPFLGVAPEDDDYYKSSDVIRCKDGSGKFTKAQFNDDFCDCADGTDEPGTSACPGGKFYCRNAGHSPVYLFSSRVNDGICDCCDGTDEYDGQVKCPNTCWEAGKVARDRLKKKIATYQEGVKLRKQEIEQAKVAMEKDEAELSKLKKEESILKGIVKQLKDHKEQIDKAEEEERLQKEKEEKQKRESEEKANEAKDKADEDTEHRNEAEKHSDIEDNTLENNHDKIENLEGSPADQDEAGDKLADVLDDDDDDDDDDEASDSHGSEGSLHNKVEENAKEAEEEPIVKSETDIKVRNKESSDEIINKGNDASENTEGLSREELGRLVASRWTGENTDKPSAEPDTTLDNEDREDPKGKNNEEYEGYASETDDDNNKYDDDSHKYDDEDEVDDEYREDEHDDLSSSYKSDSDNEPDLSDNPSWLEKIQRTVRNIFQVVNLFQAPVNQTDAARVRKEYDESSAKLSKIQSRISSLKQKLKHDFGPAKEFYSFYDHCFEGKENKYTYKVCPYKQASQEEGYSNTRLGSWDKFEDSYRVMVFSNGDKCWNGPDRSLKVKLRCGLKNEITDVDEPSRCEYVAVLSTPTLCQEERLKELQLKLDLLNSEIPANHDEL* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0191 638 MobiDBLite consensus disorder prediction 368 410 - -
Gso20g0191 638 MobiDBLite consensus disorder prediction 188 447 - -
Gso20g0191 638 Pfam Glucosidase II beta subunit-like protein 480 634 IPR036607 -
Gso20g0191 638 PANTHER BNACNNG14010D PROTEIN 7 638 - -
Gso20g0191 638 MobiDBLite consensus disorder prediction 411 425 - -
Gso20g0191 638 MobiDBLite consensus disorder prediction 270 289 - -
Gso20g0191 638 MobiDBLite consensus disorder prediction 290 333 - -
Gso20g0191 638 ProSiteProfiles MRH domain profile. 519 614 IPR044865 -
Gso20g0191 638 Coils Coil 476 503 - -
Gso20g0191 638 MobiDBLite consensus disorder prediction 188 269 - -
Gso20g0191 638 Coils Coil 610 630 - -
Gso20g0191 638 Coils Coil 149 239 - -
Gso20g0191 638 MobiDBLite consensus disorder prediction 426 441 - -
Gso20g0191 638 SUPERFAMILY Mannose 6-phosphate receptor domain 519 612 IPR009011 -
Gso20g0191 638 Gene3D - 514 612 IPR009011 -
Gso20g0191 638 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 7 638 IPR039794 -
Gso20g0191 638 Pfam Glucosidase II beta subunit-like 26 175 IPR028146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0191 Gso-Chr20 2701550 2709954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0191 22 638 Calmodulin-binding Proteins AT5G56360 58.517 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0191 K08288 - gmx:100811132 1121.3