Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0174 ATGGCCACTTCACTAACCCTATTCAAAACAACCTTTGTTTTCTTCATCATCTTCACTCTCCTCACACACCAAGCCACGGCTGATTGTGAAGCCGAATCCAAAAACAGTTGCAACAACAAAGAGAAAGCCCTACCTCTAAAAATCATAGCCATATTTACCATCTTAGCCTCAAGCATAATTGGCATAACCCTACCCTTAGTGACACGTTCAGTCCCTGCCCTAAGCCCGGAAAACGACCTCTTCATAATCGTGAAGTGCTTCGCCGCCGGAATCATCCTCGGCACGGGGTTCATGCATGTGCTCCCGGATTCCTTCGCCATGCTCTGGTCGGATTGCTTGAAGGAGAAGCCGTGGCACGAGTTTCCCTTTTCGGGCCTCGTCGCAATGTTCTCCGCCATAATCACGATGATGGTTGATTCCTTGGCCACTAGTGTTTACACCAAGAAGTGTAGGACTACTAGTGAGGTTGTTCCTGGTGAGAGCAGCCTTGAAGGTGGTGAGGAAAATTTAGAGATGGGTGCTGTTAACTTAGGGCATTTCCATGGTCACCACCATGCTCATCATGAGACTAAGATGGATGGCAAAGAGTCGCAGCTTCTACGTTATCGTGTTGTTGCCATGGTATTAGAACTTGGAATTATTGTTCATTCAGTGGTGATAGGACTTGGCATGGGAGCCTCAAATAACACGTGCACAATAAGAGGTCTTATAGCCGCCATGTGCTTCCATCAAATGTTTGAAGGAATGGGTCTTGGTGGGTGCATTCTACAGGCTGAGTACAAGTTTTTAAAGAAGGCCATCATGGTGGTCTTTTTCTCCATCACAACCCCATTTGGAATTGCCTTAGGAATTGCAATGTCCACGACCTACAAAGAGAACAGCCCAAGTGCCCTAATCACCGTGGGTTTGCTTAATGCATCATCTGCTGGGCTTTTAATCTACATGGCTTTGGTTGACCTTCTCTCTGCTGACTTCATGAGCCCAAGGTTGCAGGGTAGCATTAAGCTTCAATTAAAATCTTACGTAGCTGTGTTTTTGGGTGCTGGTGGCATGTCTCTAATGGCAAAATGGGCTTAA 1077 0.4652 MATSLTLFKTTFVFFIIFTLLTHQATADCEAESKNSCNNKEKALPLKIIAIFTILASSIIGITLPLVTRSVPALSPENDLFIIVKCFAAGIILGTGFMHVLPDSFAMLWSDCLKEKPWHEFPFSGLVAMFSAIITMMVDSLATSVYTKKCRTTSEVVPGESSLEGGEENLEMGAVNLGHFHGHHHAHHETKMDGKESQLLRYRVVAMVLELGIIVHSVVIGLGMGASNNTCTIRGLIAAMCFHQMFEGMGLGGCILQAEYKFLKKAIMVVFFSITTPFGIALGIAMSTTYKENSPSALITVGLLNASSAGLLIYMALVDLLSADFMSPRLQGSIKLQLKSYVAVFLGAGGMSLMAKWA* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0174 358 Pfam ZIP Zinc transporter 46 355 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gso20g0174 358 PANTHER ZINC/IRON TRANSPORTER 16 358 - -
Gso20g0174 358 TIGRFAM zip: ZIP zinc/iron transport family 29 358 IPR004698 GO:0005385|GO:0016021|GO:0071577
Gso20g0174 358 PANTHER ZINC TRANSPORTER 10-RELATED 16 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0174 Gso-Chr20 2367771 2370657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0174 1 358 Inorganic Solute Cotransporters AT1G31260 59.079 2.99e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0174 K14709 - gmx:100795511 656.751