Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0168 ATGGCTAGGTTGAAGGTGTTGTCTGCCCTAGACACAGCAAGGACACAATACTACCACTTCAAAGCCATCATCATTGCAGGGATGGGGCTCTTCACCGATGCCTACGACCTCTTCTCAATCACTCTCATCATCAAGATAATTGGAAGGGTATATTACGGCCACCGCGAAGGTGAAAACCGGTACGAAACCCCACCGGAGGTCGTGTCCGCCTTGGTCGCCGTCGCCCTGCTGGGCACCGCCGTCGGCCAGCTGGTATTTGGCCGGCTTGGCGACCTCAAGGGGCGACGGCGAGTGTACGGATTCGCTCTTTTGTTGATGGTCTTCAGCTCCTTGGCTTCTGGCTTCTCCATTTGCATAAGAAAAACCTGCGTTCTCCTCACTCTTGGCTTCTTCAGGTTTTTCTTGGGGCTGGGTATTGGAGGAGACTACCCTCTGTCTTCTACCATAATGTCGGAGTTTGCGAACAAGAAGACAAGAGGGTCGTTCATAGCGGCGGTGTTTTCGATGCAAGGCTTCGGCATATTGGCCAGCTCCACCGTGACCATGGCAGTGTGCTCCATATTCGGCGCAGCGTCCAAGAATTCCGAGGCTGACGTGGCATGGAGACTCATACTCATGCTCGGTTCTGTCCCCGCAGCCATGACTTACTACTGGCGCATGATGATGCCCGAAACCGCCAGGTACACAGCATTAGTGGAGCAAAATGTGATGCAAGCAGCAAAGGACATGGAGAAAGTCCTTGATGTAACACTGAGCCAGATTGCTGAAGAAGATCCTTTGCCACCAACCCCGCATCCTTACCCTCTACTTTCAAGGGAATTCTTGCGTAGGCACGGTCCTGACCTATTTGCATGTTCTTCCACATGGTTCCTTGTGGACATTGTGTTCTATAGCCAAGTTTTGTTCCAAAGTGAAATATACAAACGCTACCTAGACAAAAAGGAGGACGTGGATGTGTATCAAGAGACTTTCCATGCTGCATGGATCCAAGCCGTTATTGCTGTTTGTTCCACAATTCCTGGCTACTTCTTCTCAATGTATTTCATTGACAAATGGGGAAGGGTCAAAATCCAAATGATGGGCTTTTTCTTCATGGCATTGGCCTTTTTCTCCATTGGAATTCCCTATTACTCTTATTGGACCACCAAGGAACATCATAAGAATAAAGTGTTCATGGTGTTGTATGGACTTGCTTTTTTCTTTGCCAATTTTGGGCCCAACACTACTACTTTCATAGTCCCGGCTGAGCTTTTTCCTGCTAGGTTTAGGTCAAGTTGTCATGGCATTTCTGGGGCAGTTGGCAAGGTTGGGGCAATTATTGGGTCTGTGGGGTTTCTTTGGGCTTCACATAGAAAGAAGGAGGATGGGTACCCTAAGGGAATTGGGATGAAAGTGTCCCTTATTATACTTGGAGGGGTGTGCTTATTGGGAATGGTGATCACCTACTTTTTCACGAGGGAAACCATGGGAAGGTCTTTGGAAGAGAATGAGGTTGAGATTGAAGAGCAAGATAATCTTTGA 1521 0.4845 MARLKVLSALDTARTQYYHFKAIIIAGMGLFTDAYDLFSITLIIKIIGRVYYGHREGENRYETPPEVVSALVAVALLGTAVGQLVFGRLGDLKGRRRVYGFALLLMVFSSLASGFSICIRKTCVLLTLGFFRFFLGLGIGGDYPLSSTIMSEFANKKTRGSFIAAVFSMQGFGILASSTVTMAVCSIFGAASKNSEADVAWRLILMLGSVPAAMTYYWRMMMPETARYTALVEQNVMQAAKDMEKVLDVTLSQIAEEDPLPPTPHPYPLLSREFLRRHGPDLFACSSTWFLVDIVFYSQVLFQSEIYKRYLDKKEDVDVYQETFHAAWIQAVIAVCSTIPGYFFSMYFIDKWGRVKIQMMGFFFMALAFFSIGIPYYSYWTTKEHHKNKVFMVLYGLAFFFANFGPNTTTFIVPAELFPARFRSSCHGISGAVGKVGAIIGSVGFLWASHRKKEDGYPKGIGMKVSLIILGGVCLLGMVITYFFTRETMGRSLEENEVEIEEQDNL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0168 506 Gene3D MFS general substrate transporter like domains 18 505 IPR036259 -
Gso20g0168 506 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 2 499 - -
Gso20g0168 506 Pfam Sugar (and other) transporter 24 497 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso20g0168 506 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 489 IPR020846 GO:0022857
Gso20g0168 506 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 499 - -
Gso20g0168 506 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso20g0168 506 CDD MFS_PhT 23 488 - -
Gso20g0168 506 SUPERFAMILY MFS general substrate transporter 10 497 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0168 Gso-Chr20 2204139 2215475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0168 1 500 Inorganic Solute Cotransporters AT1G76430 60.845 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0168 K08176 - gmx:100803834 945.651