Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0145 ATGGAATCCTGGTTCATCATCCTCGTCTCTCTGAGTGTCTGCGTGTTCATAAGAACCATATTTTTCTCTCTTCACAACAAAACCATCACCACCCCTCCTGGCCCCACCCACATCCCAATCATCTCAAACATCCTATGGCTCCGAAAAACCTTAAAACTCGAACCGATCCTCCGAACCCTCCACGCCAAATACGGTCCCATGGTAACTCTCCGCATTGGATCACGCCCCGCCATATTTATCGCCGACAGAACCCTGGCCCACCAAGCCCTAATCCAAAACGGTTCCTTTTTCTCCGACCGCCCCAAAGGCCTCGCCACCGGTAAAATCCTCAACAGCAACCAACACAGCATCAGCTCCGCCTCCTACGGCCCCACGTGGCGCGCCCTCCGCCGCAATCTCGCCTCTGAGATGCTCCACCCCTCACGCGCCAGGTCCTTCTCCGGAATCCGCAAGTGGGTCCTACACACCCTCCTCACGCGCCTCAAATCAGATTCACAATCCAACTATTCAGTAAAAGTCGTTAACCATTTTCAATACGCCATGTTCTGCTTGCTTGTGTTCATGTGCTTCGGTGAAAGGCTTGACGATGGGATAGTCAGAGACATCGAGCGCGTGCAGCGACAAATGCTTCTGCGGCTCAGTAGGTTCAACGTGCTGAATTTCTGGCCAAGGGTCACGCGCGTTTTGTGCCGCAAACGTTGGGAGGAGTTGCTGAGGTTTCGCAAGGAGCAAGAGGACGTGTTGGTTCCACTAATAAGAGCCAAGAAGGAAAAGCGAGACAAAGACAATGAAGGTTCATTAAACGACGACGTAGTTGTTTCCTATGTTGACACTTTGTTGGATTTGCAATTACCTGAAGAGAAACGCAAGCTGAATGAAGGGGAACTTGTTACGCTCTGTAACGAGTTTTTGAATGCGGGTACAGATACAACTTCCACAGCGTTGCAGTGGATAATGGCGAATTTGGTGAAGTACCCTCACGTGCAAGAAAAGGTGGTGGATGAGATTAGAGAAGTAGTTGGTGAGAGAGAAGAGAGGGAAGTGAAAGAAGAAGACTTGCAGAAACTACCTTATCTGAAAGCTGTGATTTTGGAAGGGTTAAGGCGACACCCACCAGGGCACTTTGTTTTGCCTCATGCCGTGACTGAAGACGTGATTTTGAAGGATTATTTGGTGCCTAAGAATGGGACAGTGAATTTCATGGTGGCGGAGATAGGGTTAGACCCTAAGGTATGGGAGGATCCAATGGCGTTTAAGCCAGAGAGGTTTATGAATGATGAAGGGTTTGATTTTGATATAACTGGGAGTAAAGAGATTAAGATGATGCCGTTTGGTGCTGGGAGAAGGATATGCCCTGGATATAACTTGGCTTTGCTTCATTTGGAGTACTTTGTGGCTAATTTGGTTTGGAATTTTGAGTGGAAGGTTCCTGAGGGAGGGGATGTGGATTTTTCGGAGAAACAGGAATTTACTACTGTCATGAAAAATGCATTGCAGCTTCATCTTTCTCCTAGGGTCTAG 1521 0.4839 MESWFIILVSLSVCVFIRTIFFSLHNKTITTPPGPTHIPIISNILWLRKTLKLEPILRTLHAKYGPMVTLRIGSRPAIFIADRTLAHQALIQNGSFFSDRPKGLATGKILNSNQHSISSASYGPTWRALRRNLASEMLHPSRARSFSGIRKWVLHTLLTRLKSDSQSNYSVKVVNHFQYAMFCLLVFMCFGERLDDGIVRDIERVQRQMLLRLSRFNVLNFWPRVTRVLCRKRWEELLRFRKEQEDVLVPLIRAKKEKRDKDNEGSLNDDVVVSYVDTLLDLQLPEEKRKLNEGELVTLCNEFLNAGTDTTSTALQWIMANLVKYPHVQEKVVDEIREVVGEREEREVKEEDLQKLPYLKAVILEGLRRHPPGHFVLPHAVTEDVILKDYLVPKNGTVNFMVAEIGLDPKVWEDPMAFKPERFMNDEGFDFDITGSKEIKMMPFGAGRRICPGYNLALLHLEYFVANLVWNFEWKVPEGGDVDFSEKQEFTTVMKNALQLHLSPRV* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0145 506 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 SUPERFAMILY Cytochrome P450 32 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Gso20g0145 506 Pfam Cytochrome P450 32 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 504 - -
Gso20g0145 506 Gene3D Cytochrome P450 25 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 PANTHER CYTOCHROME P450 4 504 - -
Gso20g0145 506 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0145 506 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0145 Gso-Chr20 1965623 1967344 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0145 1 505 Cytochrome P450 AT1G64940 57.310 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0145 K24184 - gmx:100805244 987.252