Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0144 ATGGAAGAAGCCTGGTTCATAATCCTAGTCTCTCTCTGTGTCTGCGTTCTCATAAGAGTCATATTATTATTCTTCCTTCACAAAAAAACCCTAGCCACCCCACCAGGCCCTCCTCACATCCCAATCATCACAAGCTTTCTATGGCTCAAAAAATCCTTCATAGAACTCGAGCCATTCCTCCGAACCCTCGCCGCCAAACACGGTCCTATCTTCACTCTCCGCATAGGATCACGCCCCGTCATATTCATCGCCAACAGAGCCCTGGCCCACCAAGCCCTAATCCAAAACGGTTCCATTTTCTCCGATCGCCCCAAGGCCCTCCCCGCCGCCAAAATCGTCAGCAGCAACCAACACAACATCAACTCCGCCCCCTACGGCGCCACCTGGCGCGCCCTACGCCGCAACCTCGCCTCCGAGATGCTCCACCCCTCACGCGTCATGTCCTTCTCCGGTACCCGCAAGTGGGTCCTACACACCCTCCTCACGCGCCTCAAATCAGATTCACAATCCAACGATTCAATAAAAGTCATTAACCACTTCCAATACTCCATGTTCTGCTTGCTTGTGTTTATGTGCTTCGGGGAAAGACTCGACGATGGGAAAGTCAGAGACATCGAGCGCGTGCAGCGACAAATGCTCCTGCGGTTTAGAAGGTTCAATGTCCTCAATTTCTGGCCCAGAGTCACGCGCGTTTTGTTCTTCAAACTATGGGAGGAGTTGCTGAGGGTTAGGAAGGAGCAAGAGGACGTGTTGGTTCCGCTTATCAGAGCCAGGAAGCAAAGGCGAGGCACTGAAGGTGGCGGATTAAGAGACGATGATGGCTTCGTTGTTTCCTATGTTGACACGTTGTTGGATTTGGAATTGCCTGAGGAGAAACGGAAGCTGAATGAAGAGGAACTCGTGACGTTGTGTAGCGAGTTTTTGAATGCGGGTACGGACACGACTTCGACGGCGTTGCAGTGGATAATGGCTAATTTGGTGAAGTACCCGCACGTGCAAGAGAGGGTGGTGGAGGAGATTAAGGAGGTGGTTGGTGAGAGAGTGAGAGAAGAGAGGGAGGTGAAAGAAGAAGATTTGCAGAAACTACCTTATCTGAAAGCTGTGATTTTGGAAGGGTTGAGGCGTCACCCACCTGGCCACTTTGTTTTGCCGCATGCTGTCACCGAGGACGTGGTTTTTAATGATTATTTGGTTCCTAAGAATGGGACAGTGAATTTCATGGTGGCGGAGATAGGGTGGGACCCTAAGGTTTGGGAAGATCCAATGGCGTTTAAGCCAGAGAGGTTTATGAATGATGAAGGGTTTGATTTTGATATAACTGGGAGTAAAGAGATTAAGATGATGCCCTTTGGTGCAGGGAGAAGAATTTGCCCTGGCTATAACTTGGCTTTGCTTCATTTGGAATACTTCGTGGCTAATTTGGTTTGGAATTTTGAGTGGAAGGTTCCTGAGGGAGGGGATGTGGATTTTTCGGAGAAACAGGAGTTTACTACTGTCATGAAAAATGCATTGCAGGTTCAGCTTTCTCCTAGGATATGA 1539 0.4945 MEEAWFIILVSLCVCVLIRVILLFFLHKKTLATPPGPPHIPIITSFLWLKKSFIELEPFLRTLAAKHGPIFTLRIGSRPVIFIANRALAHQALIQNGSIFSDRPKALPAAKIVSSNQHNINSAPYGATWRALRRNLASEMLHPSRVMSFSGTRKWVLHTLLTRLKSDSQSNDSIKVINHFQYSMFCLLVFMCFGERLDDGKVRDIERVQRQMLLRFRRFNVLNFWPRVTRVLFFKLWEELLRVRKEQEDVLVPLIRARKQRRGTEGGGLRDDDGFVVSYVDTLLDLELPEEKRKLNEEELVTLCSEFLNAGTDTTSTALQWIMANLVKYPHVQERVVEEIKEVVGERVREEREVKEEDLQKLPYLKAVILEGLRRHPPGHFVLPHAVTEDVVFNDYLVPKNGTVNFMVAEIGWDPKVWEDPMAFKPERFMNDEGFDFDITGSKEIKMMPFGAGRRICPGYNLALLHLEYFVANLVWNFEWKVPEGGDVDFSEKQEFTTVMKNALQVQLSPRI* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0144 512 Gene3D Cytochrome P450 26 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Gso20g0144 512 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PANTHER CYTOCHROME P450 5 510 - -
Gso20g0144 512 SUPERFAMILY Cytochrome P450 34 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 Pfam Cytochrome P450 34 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0144 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0144 Gso-Chr20 1949861 1951869 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0144 3 511 Cytochrome P450 AT1G64940 57.171 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0144 K24184 - gmx:100795683 964.526