Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0143 ATGCCGCCAGTGGCGAGACAGGTTAGGAGGTATCGCCATTTCTTCCAGCGGGATACTCCTCTCTGTAAATATTCTCTTTTTTATTTTTTTCCTTTTCTTTCCCTGGTCTTCTATGAATACCACAGCCAACTCTTTCTTTCTTCCTCTCCCCCTCTCATTGCTCCCTTGATTCATTCACCCAGTTTTTTTTTTCTGTCCTCTTTTCCTCTCAGAGGAGCCTCTGAGTCTGCTCAGGAAGGTATGGGAGCTACCTATGGCACAACGAAGAGTGGCGTGGGCGTGGCTTCAATAGGTGTGATGAGATCGGAGTTGGTGATGAAGTCTATTGTCCCTGTTGTTATGGCGCAACTCTCCTCTGGTCTTGCTTGTGGGCTGGTTGGTCTTTCTGCTGGCATGGCTATTGGTATTGTTGGTGATGCTGGTGTTAGGATGGGCAGAAGAGAATCCAAACACGTCTATCATCACTCAAACTTGTGGTGTTGTGAGGACAAAGTACCAACCAACAAAGGATGGCCCAATCTAATTGTAACATACCTATGA 540 0.4648 MPPVARQVRRYRHFFQRDTPLCKYSLFYFFPFLSLVFYEYHSQLFLSSSPPLIAPLIHSPSFFFLSSFPLRGASESAQEGMGATYGTTKSGVGVASIGVMRSELVMKSIVPVVMAQLSSGLACGLVGLSAGMAIGIVGDAGVRMGRRESKHVYHHSNLWCCEDKVPTNKGWPNLIVTYL* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0143 179 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 80 178 - -
Gso20g0143 179 Gene3D - 66 117 IPR035921 -
Gso20g0143 179 Gene3D - 118 156 IPR035921 -
Gso20g0143 179 PRINTS Vacuolar ATP synthase 16kDa subunit signature 83 107 IPR000245 GO:0033179|GO:0046961|GO:1902600
Gso20g0143 179 PRINTS Vacuolar ATP synthase 16kDa subunit signature 109 133 IPR000245 GO:0033179|GO:0046961|GO:1902600
Gso20g0143 179 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 80 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0143 Gso-Chr20 1935508 1949407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0143 80 150 Primary Pumps ATPases(2) AT4G34720 57.282 3.11e-26 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0143 K02155 - gmx:102661642 338.961