Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0142 ATGGAAGCCTGGTTCATCGTCATCGTCTCTCTCTGTGTCTGCGTTCTCATCAGAGCCATCTTCTCCCTTTTTCACAACAAAACCATAACCACCCCACCAGGCCCTCCCAACATCCCTGTCATCACAAGCTTCCTATGGCTCCGAAAAACCTTCTCCGAACTCGAGCCAATCCTCCGAAACCTCCACACCAAATACGGCCCCATCGTAACTCTCCCAATCGGTTCCCACCGCGTCATCTTCATTGCCGACAGAACCCTGGCCCACCAAGCCCTAATCCAAAACGGTTCCCTCTTCTCCGACCGCCCCAAGGCCCTCGCCATCGGCAAAATCTTATCTTGCAACCAGCACAACATCAACTCCGCCTCCTACGGCCCCACGTGGCGCACCCTCCGCCGCAACCTCGCCTCCGAGATGCTCCACCCCTCACGCGCCAAGTCCTTCTCCGAAATCCGCAAGTGGGTCCTACACACCCTCCTCACGCGCCTCAAATCAGATTCACAGTCCAACGACTCAATAAAAATCATTGACCACTTCCAATACGCCATGTTTTGCTTGCTCGTGTTCATGTGCTTCGGTGAAAGACTCGACGATGGGAAAGTCAGAGACATCGAGCGAGTGCTGCGCCAACTGCTTCTGGGCATGAACAGGTTCAACATCCTCAATTTCTGGAACCCAGTCATGCGGGTTTTGTTCCGCAATCGTTGGGAGGAGTTGATGAGGTTTCGCAAGGAGAAAGATGACGTGTTTGTTCCGCTTATAAGAGCCAGGAAGCAAAAGCGAGCCAAGGACGATGTCGTAGTCTCATACGTTGACACGTTGTTGGATTTGGAACTACCTGAGGAGAAACGCAAGCTCAGCGAAATGGAAATGGTGACGCTTTGTAGCGAGTTTATGAACGCGGGTACGGACACTACTTCGACGGCATTGCAGTGGATAATGGCGAATTTGGTGAAGTACCCTCACGTGCAAGAAAAGGTAGTGGATGAGATTAGAAGCGTGTTGGGTGAAAGAGTGAGAGAAGAGAATGAAGTGAAAGAAGAAGATTTGCAGAAACTGCCTTATCTGAAAGCTGTGATTTTGGAAGGGTTGAGGCGTCACCCACCTGGCCACTTTGTTTTGCCGCATGCTGTCACCGAGGACGTGGTTTTTAATGATTATTTGGTGCCTAAGAATGGGACGGTTAATTTCATGGTGGCGGAGATGGGGTGGGACCCTAAGGTGTGGGAGGATCCAATGGCGTTTAAGCCAGAGAGATTTATGAACGAAGAAGGGTTTGATATAACTGGGAGTAAAGAGATTAAGATGATGCCGTTTGGTGCTGGGAGAAGGATATGCCCTGGATATAACTTGGCTTTGCTTCATTTGGAGTACTTTGCGGCTAATTTGGTTTGGAATTTTGAGTGGAAGGTTCCTGAGGGAGGGAATGTGGATTTGTCGGAGAAACAAGAATTCACTGTTGTGATGAAAAATGCATTGCTGGTTCATATTTCTCCTAGGATCTAG 1503 0.4977 MEAWFIVIVSLCVCVLIRAIFSLFHNKTITTPPGPPNIPVITSFLWLRKTFSELEPILRNLHTKYGPIVTLPIGSHRVIFIADRTLAHQALIQNGSLFSDRPKALAIGKILSCNQHNINSASYGPTWRTLRRNLASEMLHPSRAKSFSEIRKWVLHTLLTRLKSDSQSNDSIKIIDHFQYAMFCLLVFMCFGERLDDGKVRDIERVLRQLLLGMNRFNILNFWNPVMRVLFRNRWEELMRFRKEKDDVFVPLIRARKQKRAKDDVVVSYVDTLLDLELPEEKRKLSEMEMVTLCSEFMNAGTDTTSTALQWIMANLVKYPHVQEKVVDEIRSVLGERVREENEVKEEDLQKLPYLKAVILEGLRRHPPGHFVLPHAVTEDVVFNDYLVPKNGTVNFMVAEMGWDPKVWEDPMAFKPERFMNEEGFDITGSKEIKMMPFGAGRRICPGYNLALLHLEYFAANLVWNFEWKVPEGGNVDLSEKQEFTVVMKNALLVHISPRI* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0142 500 Gene3D Cytochrome P450 25 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PANTHER CYTOCHROME P450 4 498 - -
Gso20g0142 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Gso20g0142 500 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 498 - -
Gso20g0142 500 Pfam Cytochrome P450 32 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 SUPERFAMILY Cytochrome P450 32 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0142 500 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0142 Gso-Chr20 1925701 1927612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0142 1 499 Cytochrome P450 AT1G64940 55.922 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0142 K24184 - gmx:100788826 993.03