Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0137 ATGGAGAACATTCTGGGTCTCATCAAACTTCGTATCAAAAGAGGCACTAATCTCAAAGTTTGTGATACTCGTACCTGTGACCCATATGTCTTTGTCACCATGGCCGAACAGAAACTGAAAACTGGTGTTGTGAAAGATAGCATTAATCCAGAGTGGAATGAAGAATTGACACTTTATACAGTTTCAGACAAAGACACTTTCTCTGTAGATGACAGCATGGGCGATGCAGAGATAGACTTAAAGCCGTATCTTCAGTGTGTGAAGATGGACTTGAGCGATCTTCCTGATAGCCATGTAGTCAAGAGGGTTCAACCAGATAGGACTAACTGCCTTGCTGAAGAGAGCAGCTGCATATGGAAGAATGGAAAACTCATCCAAGAGATGAGTTTAAGATTGAGAAATGTTAAGTCTGGGGAAATAACTGTGGAAATTGAGTGGGTTAATCTTCCAGATTCAAAGGGCTTATCAGAAGTTGAGTTTTAG 483 0.4099 MENILGLIKLRIKRGTNLKVCDTRTCDPYVFVTMAEQKLKTGVVKDSINPEWNEELTLYTVSDKDTFSVDDSMGDAEIDLKPYLQCVKMDLSDLPDSHVVKRVQPDRTNCLAEESSCIWKNGKLIQEMSLRLRNVKSGEITVEIEWVNLPDSKGLSEVEF* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0137 160 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 160 IPR044562 -
Gso20g0137 160 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 160 - -
Gso20g0137 160 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Gso20g0137 160 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 147 IPR035892 -
Gso20g0137 160 Pfam C2 domain 7 82 IPR000008 -
Gso20g0137 160 Gene3D C2 domain 4 154 IPR035892 -
Gso20g0137 160 SMART C2_3c 7 92 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0137 Gso-Chr20 1855453 1856994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0137 38 156 C2H2 Transcription Factor Family AT1G70790 51.908 1.30e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0137 - - gmx:100790940 318.161