Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0125 ATGGAGACTAATAATGCATGTACTATGCATTCTCATTGCATAGAGATGTCCATGGAAGTGCACCAAGTTGTGCCACCACCTCACAAGAGCACCCTTCAGAAACTCAAGGGTAGGCTCAAGGAAACTTTCTTCCCTGATGATCCTCTGCGCCAATTCAAGGGACAACCTCTTAAGAGAAAACTGATCCTTGGAGCTCAATATGTGTTCCCTATTCTCCAATGGGGTCCTAAGTATAATCTCAAACTCTTCAAATCTGACCTTGTTTCTGGCCTCACTATTGCTAGCTTGGCCATCCCGCAGGGAATTAGTTATGCTAAGCTTGCAAGTCTTCCTCCAATTGTTGGACTTTATTCTAGTTTTGTTCCACCACTTGTCTATGCTGTTCTTGGAAGCTCAAAGGACCTTGCAGTTGGACCTGTTTCTATTGCTTCTCTTGTGATGGGATCCATGTTGCATCAGGAAGTGTCTCCCACAACAGATCCAATTCTGTTTCTTCAGCTAGCTTTCACTTCAACATTATTTGCCGGTCTCTTTCAAGCTTTGCTTGGAATCCTAAGGCTAGGCTTCATAATTGATTTTCTATCTAAGGCCATTCTTATTGGGTTCATGGCTGGAGCTGCTATTATTGTCTCACTGCAACAGCTCAAGAGCCTGCTTGGAATCACACATTTCACTAATCAGATGGGTCTGATTCCTGTTATGACTTCTGTTTTTCACAATATACATGAGTGGTCATGGCAAACAATATTGATGGGGATTTGCTTCTTGGTACTACTACTATTAGCAAGACACGTTAGCATAAGGAAACCAAAACTATTCTGGGTCTCAGCTGGAGCTCCTCTTATGTGTGTCATCATCTCTACCCTCTTGGTTTTTGCAATTAAGGCTCAAAATCATGGCATCAGTGTGATTGGGAAATTGCAAGAAGGAATAAATCCTCCATCATGGAATATGTTGCTCTTTCATGGAAGTCACCTGGACCTAGTCATGAAAACAGGGCTTATCACTGGGATTTTGTCCCTCACTGAAGGTATTGCAGTAGGAAGGACATTTGCAGCTCTCAAAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATTGGGTTTATGAATGTTGTTGGCTCCTTCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGGTCAGCAGTTAACAACAATGCAGGCGCAAAAACAGCTGTGTCAAATGTAGTGATGTCTGTGACAGTCATGGTGACACTCCTTTTTCTCATGCCATTGTTTCAATACACGCCTAATGTCGTGCTGGGCGCAATCATAGTCACAGCAGTAATTGGCCTCATCGATCTCCCCGCTGCTTGTAACATTTGGAAGATCGACAAATTCGATTTTGTTGTGATGATGACTGCTTTCTTAGGTGTTCTTTTCATCTCTGTCCAAGGAGGCCTTGCTCTTGCTGTTGGATTATCAACTTTGAAGATACTCTTGCAAATTACGAGACCGAAAACAGTGATGTTGGGGAAGATACCAGGAACAGACATATATAGAAATCTTGATCAATACAAGGAAGCTGTGAGAATACCTGGATTTCTTATTTTAAGCATTGAGGCTCCCATCAATTTTGCCAACATCACATATCTCAACGAGAGAACGTTAAGATGGATTGAAGAAGAAGAAGACAACATAAAGGAACAATTAAGCCTTCGATTCTTAGTATTGGAAATGTCAGCTGTGAGTGCTGTTGACACAAGTGGAATCTCACTTTTCAAGGAGTTGAAAGCAACACTGGAAAAGAAAGGTGTTGAGCTTGTGTTGGTCAATCCTCTTGCTGAGGTCATAGAAAAGCTTAAAAAAGCAGATGAAGCTAATGATTTCATAAGAGCAGATAACCTTTTCTTGACAGTTGGAGAGGCTGTAGCTTCACTTTCTTCAGCAATGAAAGGCCAATCATCAACCATTACAGAAGGGGCACACACAATTGTGTCACATAATTGA 1977 0.4173 METNNACTMHSHCIEMSMEVHQVVPPPHKSTLQKLKGRLKETFFPDDPLRQFKGQPLKRKLILGAQYVFPILQWGPKYNLKLFKSDLVSGLTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYAVLGSSKDLAVGPVSIASLVMGSMLHQEVSPTTDPILFLQLAFTSTLFAGLFQALLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMTSVFHNIHEWSWQTILMGICFLVLLLLARHVSIRKPKLFWVSAGAPLMCVIISTLLVFAIKAQNHGISVIGKLQEGINPPSWNMLLFHGSHLDLVMKTGLITGILSLTEGIAVGRTFAALKNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDLPAACNIWKIDKFDFVVMMTAFLGVLFISVQGGLALAVGLSTLKILLQITRPKTVMLGKIPGTDIYRNLDQYKEAVRIPGFLILSIEAPINFANITYLNERTLRWIEEEEDNIKEQLSLRFLVLEMSAVSAVDTSGISLFKELKATLEKKGVELVLVNPLAEVIEKLKKADEANDFIRADNLFLTVGEAVASLSSAMKGQSSTITEGAHTIVSHN* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0125 658 CDD STAS_SulP_like_sulfate_transporter 515 629 - -
Gso20g0125 658 Coils Coil 603 623 - -
Gso20g0125 658 PANTHER SULFATE TRANSPORTER 19 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso20g0125 658 ProSiteProfiles STAS domain profile. 514 636 IPR002645 -
Gso20g0125 658 TIGRFAM sulP: sulfate permease 70 632 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso20g0125 658 SUPERFAMILY SpoIIaa-like 520 636 IPR036513 -
Gso20g0125 658 Pfam Sulfate permease family 83 463 IPR011547 GO:0016021
Gso20g0125 658 Pfam STAS domain 515 632 IPR002645 -
Gso20g0125 658 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271|GO:0008272
Gso20g0125 658 PANTHER BNAA09G30120D PROTEIN 19 643 IPR030313 -
Gso20g0125 658 Gene3D STAS domain 494 638 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0125 Gso-Chr20 1637617 1645083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0125 15 643 Inorganic Solute Cotransporters AT3G15990 66.244 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0125 K17471 - gmx:100819130 1256.51