Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0118 ATGAGTTTGGGAACCGCTGAGGACGAATCCGGTTCCGAAATCCACATCCCAGCCGAAATCGACTGGCACATGCTGGACAAATCCAAGTTCTTCTTCCTCGGCGCCGCCTTATTCTCCGGCGTGTCATGCGCACTCTACCCCATGGTCGTGTTGAAGACGCGCCAGCAAGTTTCCTCCTCACGCTTCTCCTGCCTCAACATCTCCTGCGCCATTCTCCGCCACGAGGGCCTCCGCGGCTTCTACAAGGGCTTCGGAACCTCCCTCATGGGAACCATCCCCGCACGTGCGCTCTACATGGTCTCCCTCGAGATCACCAAGAGCAACGTCGCCACCGCCTTCCTCCAATTCGGCTTCTCCGAGACCACCGCCGTGGCTGTGGCCAACGCCGCCGCGGGCGTCACCTCCGCCATGGCGGCCCAGCTCGTGTGGACCCCAATTGATGTCGTGAGTCAGCGGCTCATGGTTCAGGGGAGTGGCGGGAGTAAAACCACAGTGCTCGCGAATCTCAATTCGGAAAATTACAGAAGCGGGTTTGATGCTTTTAGGAAAATTATGTGTGCTGATGGAGCGAGAGGGTTTTATAGAGGCTTTGGGATTTCTATATTGACTTATGCGCCTTCCAATGCGGTTTGGTGGACTTCTTATTCCATGGTTCATAGACTCATTTGGGGTGCTTTTGGTGTGCTTTTGGGAAATGAAAAGAATGATAGTAATAAGTATAGCAGGTCTGATTCGAAGGCAATGGTGGCGGTTCAGGGGTTGAGTGTTGTTATGGCAAGTGGGGTATCTGCGATTGTGACAATGCCGTTTGATACGATAAAGACGAGGTTGCAGGTGTTGGATCTTCAAGAGGGGAATGGGAGAAGGAGGCCTTTGACTTTTGTTCAGACGGTGAGGAATTTGGTGAAGGAAGGTGGGTTGCTTGCTTGTTACAGAGGATTGGGTCCGAGATGGGCTTCCATGTCCATGTCTGCCACAACTATGATTACTACTTATGAGTTTTTGAAAAGAATGTCTACCAAGAATCAAGAGGATTTGAGTCCACCATAG 1050 0.52 MSLGTAEDESGSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSCALYPMVVLKTRQQVSSSRFSCLNISCAILRHEGLRGFYKGFGTSLMGTIPARALYMVSLEITKSNVATAFLQFGFSETTAVAVANAAAGVTSAMAAQLVWTPIDVVSQRLMVQGSGGSKTTVLANLNSENYRSGFDAFRKIMCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGVLLGNEKNDSNKYSRSDSKAMVAVQGLSVVMASGVSAIVTMPFDTIKTRLQVLDLQEGNGRRRPLTFVQTVRNLVKEGGLLACYRGLGPRWASMSMSATTMITTYEFLKRMSTKNQEDLSPP* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0118 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 247 338 IPR018108 -
Gso20g0118 349 SUPERFAMILY Mitochondrial carrier 23 335 IPR023395 -
Gso20g0118 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 345 - -
Gso20g0118 349 Gene3D Mitochondrial carrier domain 28 347 IPR023395 -
Gso20g0118 349 PRINTS Mitochondrial carrier protein signature 40 58 IPR002067 GO:0055085
Gso20g0118 349 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Gso20g0118 349 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Gso20g0118 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 221 IPR018108 -
Gso20g0118 349 Pfam Mitochondrial carrier protein 253 342 IPR018108 -
Gso20g0118 349 Pfam Mitochondrial carrier protein 125 223 IPR018108 -
Gso20g0118 349 Pfam Mitochondrial carrier protein 36 109 IPR018108 -
Gso20g0118 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Gso20g0118 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0118 Gso-Chr20 1483849 1485520 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0118 1 344 Chloroplast and Mitochondria Gene Families AT5G26200 64.489 3.59e-159 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0118 K15121 - gmx:100798870 661.373