Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0115 ATGATGGAGTCAACGACCCACAAGTACCCCTTCATAAAAAACTATGCCTTTTTCTACTTCTGCTTCTTTCTATGTCCTCTCTTAGTCTCAGCTTCTTCAAAATCAACCAATTCATTCCCTAAAGAAGCATTCCCAACAAAGCATGGTTACCTTCCAATAAGTCCCACTTCAACTTCTTCCATTTTCTATGCTTTCTACGAAGCACAGAACTCAACTTTACCTCTCTCTCAAACTCCACTTCTCATATGGCTCCAAGGTGGTCCTGGCTGCTCCTCCATGATTGGAAACTTGTATGAACTTGGACCGTGGCGTGTCACCGAATCACTCACCCTTCAACCCAACCCTGGTGCTTGGAATAGAATCTTTGGCCTTCTTTTCCTTGACAATCCCATTGGAACTGGCCTCAGTGTGGCCTCAACGAGACAAGAAATTCCAACGGATCAAAACGGCATTGCAAAGCATCTTTTTGCTGCTATAACCAGGTTTGTTCAACTTGACCCCCTTTTCAAGAATCGCCCTATTTATATTACTGGTGAAAGCTATGCAGGGAAGTATGTGCCTGCAATTGGGTACTATATATTAGAGAAAAATGCAAACTTGAATGTTTCTGAAAGAGTGAATTTGGCTGGTGTGGCTATTGGGGATGGATTAACTGACCCCGAAACTCAAGTGGTTAGTCATGCTGTGAATGCTTATTATGTTGGATTGATCAATAAGAGGCAGAAGAATGAGTTGGAGAAAGCTCAATTGGAAGCAGTTAGATTGGCCCAGATGGGCAATTGGAGTGAAGCAACTGATGCAAGAAACAAAGTCTTGAAAATGTTGCAGAGCATGACAGGGTTGGCTACTTTATATGACTATACAAGGAAAACACCCTATGAGGATGATTTGGTTGAGCAATTCTTGAACATTGGCGAGGTGAAGAAGGCCTTGGGGATCAATGAATCATTTGCGTATGAGTCATGCAGTGATGTTGTTGGGGATGTATTACATGCTGATGTGATGAAAAGTGTGAAATATATGGTGGAATACTTGTTGAGTAGGAGCAAGGTGTTGTTATATCAAGGTCAGCATGATTTGAGGGATGGTGTGGTTCAAACAGAGGTTTGGGTGAAGACAGTGAAATGGGAAGGGATTGTGGAATTTCTGAATTCTGAAAGAAAAATATGGAAGGTTAATGGAGAGCTTGCAGGGTATGTTCAAAATTGGAAGTCTCTCACCAATGTTGTGGTTTTGGGGGCTGGTCATCTTTTGCCTACTGATCAGCCAGTTAATTCTCAAAAAATGATAGAAGATTGGGTTTTGGAAAGGGGTTTGTTTAAATAG 1326 0.4178 MMESTTHKYPFIKNYAFFYFCFFLCPLLVSASSKSTNSFPKEAFPTKHGYLPISPTSTSSIFYAFYEAQNSTLPLSQTPLLIWLQGGPGCSSMIGNLYELGPWRVTESLTLQPNPGAWNRIFGLLFLDNPIGTGLSVASTRQEIPTDQNGIAKHLFAAITRFVQLDPLFKNRPIYITGESYAGKYVPAIGYYILEKNANLNVSERVNLAGVAIGDGLTDPETQVVSHAVNAYYVGLINKRQKNELEKAQLEAVRLAQMGNWSEATDARNKVLKMLQSMTGLATLYDYTRKTPYEDDLVEQFLNIGEVKKALGINESFAYESCSDVVGDVLHADVMKSVKYMVEYLLSRSKVLLYQGQHDLRDGVVQTEVWVKTVKWEGIVEFLNSERKIWKVNGELAGYVQNWKSLTNVVVLGAGHLLPTDQPVNSQKMIEDWVLERGLFK* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0115 441 Coils Coil 238 258 - -
Gso20g0115 441 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 431 IPR001563 GO:0004185|GO:0006508
Gso20g0115 441 Pfam Serine carboxypeptidase 43 434 IPR001563 GO:0004185|GO:0006508
Gso20g0115 441 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Gso20g0115 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Gso20g0115 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Gso20g0115 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Gso20g0115 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 406 419 IPR001563 GO:0004185|GO:0006508
Gso20g0115 441 Gene3D alpha/beta hydrolase 28 439 IPR029058 -
Gso20g0115 441 PANTHER CARBOXYPEPTIDASE 36 431 - -
Gso20g0115 441 SUPERFAMILY alpha/beta-Hydrolases 43 434 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0115 Gso-Chr20 1422737 1424543 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0115 295 434 Calmodulin-binding Proteins AT2G22960 23.077 4.16e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0115 K09645 - gmx:102663282 888.256