Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0093 ATGATGAATTGCTTGGCCATGGTTTGCATGACTTTGATTGACCAGTTGATATTAACACCAGAATTTTGTATGTTCCATGCCTTTTATTGCTTTGTCATAACAAATATTGTGCTTCATCAATGCAGGCGATGCCTAAATGGTAAGCTAACCAAAGCAAAAATTTGTTCCATTCTTTCCAATTGCTTAAAAGAAGTTAGCTCACGGCAGATCCATATAAACATGATGACTCCAAACTTGAATCTGGAACCAGAAGATGATTTTAAAGTCCTCATCCAAGTAGGTTCTGATAAGTCGATACGAGAGACATCACATGATCTTACCAAGGCCGATCCTGACCCAGGTCCTGTTTCCCTGGACTTGTCCCTCAACTTCAATCCCGGTGATGAAGAGTTGAAAGTTACAAGTGACACTAACTGTGAAGTAGGACCTGAAACTCATGCCTCAGCATCAGCAATTCCTAGAGTTTTCTCTTGTAATTATTGCTGGCGGAAATTCTTTAGCTCACAGGCATTAGGTGGACACCAGAATGCTCACAAAAGGGAGAGGACAATGGCGAAGCACGCAATGCGAATGGGGATGTTCGCTGAAAGGTACACAAGCCTAGCATCTCTGCCTCTTCATGGTTCCTCTTTTCAGTCGCTCGGACTTGAAGCTCATGCTGCAATGCACCAAGGACATGTGCATCATCATTCAATGAGGGCTCCTGATATAAGAGCTGCAGCAAAATTCGGTAAAGACTATTTTCGGATGCCGATCTTCTTGGAAGATGATGATGTCGGTCTATTTTGGCCTGGAAGTTTCAGACAGACTGATGAAAGGGGTGGTGTTAATTTGGGGCATGGTGAGCATGCTCATAATTCAAATACTTGTTTTGTAGTAGCAACTGCACCTCCAGCACAAACATCTGCATCTCCTGATCTCACTCTGAGGCTTTAA 936 0.4306 MMNCLAMVCMTLIDQLILTPEFCMFHAFYCFVITNIVLHQCRRCLNGKLTKAKICSILSNCLKEVSSRQIHINMMTPNLNLEPEDDFKVLIQVGSDKSIRETSHDLTKADPDPGPVSLDLSLNFNPGDEELKVTSDTNCEVGPETHASASAIPRVFSCNYCWRKFFSSQALGGHQNAHKRERTMAKHAMRMGMFAERYTSLASLPLHGSSFQSLGLEAHAAMHQGHVHHHSMRAPDIRAAAKFGKDYFRMPIFLEDDDVGLFWPGSFRQTDERGGVNLGHGEHAHNSNTCFVVATAPPAQTSASPDLTLRL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0093 311 SUPERFAMILY beta-beta-alpha zinc fingers 154 184 IPR036236 -
Gso20g0093 311 ProSiteProfiles Zinc finger C2H2 type domain profile. 156 183 IPR013087 -
Gso20g0093 311 PANTHER ZINC FINGER PROTEIN 3-RELATED 81 311 - -
Gso20g0093 311 ProSitePatterns Zinc finger C2H2 type domain signature. 158 178 IPR013087 -
Gso20g0093 311 PANTHER ZINC FINGER PROTEIN JAGGED 81 311 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0093 Gso-Chr20 1081118 1082622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0093 150 311 C2H2 Transcription Factor Family AT1G66140 44.086 7.73e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0093 - - gmx:100792169 632.098