Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0091 ATGGCTCGTGGCTTCCAAGTTCGAGCTACTTCAGTTACCATATTTGCTCATTTGTTGTTCATAGCAATAGCAACCCTTGTGTTAGTTTGGTTGCTACACTTTCGAGAAGGTGTGGCCTTCTTCAGCTCTTCCAACCCAGTCAAGATTTTCAACCTGCATCCTCTTCTAATGGTAATTGGATTTATTTTAGTTGGTGGAGAAGCAATCATGATATACAAGTCGGTGCCTGAAAAAAGGAGGTCAGTGAAGGTGGTTCACCTCCTATTGCATCTGATAGCTTTAGTGGCTGGAATTATAGGGATTATTGCAGTTTTCAAATCTAAGAAAGAGGCAGGTCTTGCTGATATGTATACATTACACTCTTGGCTAGGCATGTCAGCAATCTCACTATTTGGCTTACAGTATATATTTGGGTTCTTTGCTTATTTCTTCCCCGGTGCAGAAATGTCTGCTAGAGCTTCCCTTTTGCCATGGCACAGGTTTATGGGCATGGCCATATTCCTCCTTGCAGTTGCCACAGCTGAGACGGGTTTGGTTGAATATTTCCAGTTTTTACAGCTTTTCCGCACTCAAGAGGCACTAATTATCAACTCCACTGGTCTCTTACTCTTCCTCTTTGCCGTCTTTGTTACCCTCTCTGTCATTCTCCAAAGAAATTACTGA 663 0.4253 MARGFQVRATSVTIFAHLLFIAIATLVLVWLLHFREGVAFFSSSNPVKIFNLHPLLMVIGFILVGGEAIMIYKSVPEKRRSVKVVHLLLHLIALVAGIIGIIAVFKSKKEAGLADMYTLHSWLGMSAISLFGLQYIFGFFAYFFPGAEMSARASLLPWHRFMGMAIFLLAVATAETGLVEYFQFLQLFRTQEALIINSTGLLLFLFAVFVTLSVILQRNY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0091 220 Pfam Eukaryotic cytochrome b561 52 180 IPR006593 -
Gso20g0091 220 PANTHER CYTOCHROME B561 FAMILY PROTEIN, EXPRESSED 6 216 - -
Gso20g0091 220 PANTHER CYTOCHROME B561-RELATED 6 216 IPR043205 GO:0016491
Gso20g0091 220 Gene3D - 5 220 - -
Gso20g0091 220 CDD Cyt_b561_ACYB-1_like 43 186 - -
Gso20g0091 220 SMART 561_7 52 178 IPR006593 -
Gso20g0091 220 ProSiteProfiles Cytochrome b561 domain profile. 15 215 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0091 Gso-Chr20 1066647 1068683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0091 6 213 Chloroplast and Mitochondria Gene Families AT4G25570 43.868 2.90e-58 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0091 K08360 - gmx:100785824 390.578