Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0069 ATGGATCGTTCTGCTATGACTGTTGGGCCAGGAATGGATATGCCGATCATGCATGACAGTGACAGGTATGAGCTGGTCCGTGATATTGGGTCTGGGAATTTTGGGGTGGCAAGGCTCATGAGAGACAAGCACACTGAGGAGCTTGTTGCTGTCAAGTATATTGAGAGAGGTGATAAGATAGATGAAAATGTACGAAGGGAAATTATAAATCACAGATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGGTAATATTGACCCCTACACATTTGGCTATTGTGATGGAATACGCTTCTGGAGGAGAGTTATTTGAGCGGATATGCAATGCAGGACGGTTTAGTGAGGATGAGGCACGCTTCTTCTTCCAACAACTTATATCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGCCATCGTGACTTGAAGTTGGAGAACACATTGCTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTTGGGTATTCGAAGTCCTCTGTGCTACATTCACAACCTAAATCTACTGTTGGTACCCCTGCATACATTGCTCCTGAAGTTTTGCTTAAGAAGGAATATGACGGCAAGATTGCAGATGTGTGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGTGCATATCCTTTTGAGGATCCAGAGGAACCTAAAAATTTCCGGAAGACAATTCATAGGATTTTGAAAGTCCAGTACTCAATTCCTGATTATGTTCATATATCTCCCGAGTGCCGTCATCTAATCTCAAGGATCTTTGTGGCAGACCCTGCACAGAGAATAAGTATTCCCGAGATTCGAAATCACGAGTGGTTTTTGAGGAACCTGCCGGCTGATCTTATGGTCGAGAACACAATGAACAACCAGTTTGAGGAGCCTGATCAACCAATGCAGAGCATTGAAGAAATCATGCAGATAATCAGTGAGGCTACAATTCCTGCAGCCGGAACTCAGTCTCTCAACCAGTATCTTACCGGTAGCTTGGACATTGATGATGACGACATGGATGAGGACCTAGAGACGGATCCCGACCTCGACATTGATAGCAGTGGAGAAATAGTTTATGCAATGTAA 1095 0.4438 MDRSAMTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKHTEELVAVKYIERGDKIDENVRREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILKVQYSIPDYVHISPECRHLISRIFVADPAQRISIPEIRNHEWFLRNLPADLMVENTMNNQFEEPDQPMQSIEEIMQIISEATIPAAGTQSLNQYLTGSLDIDDDDMDEDLETDPDLDIDSSGEIVYAM* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0069 364 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 14 359 - -
Gso20g0069 364 Gene3D Transferase(Phosphotransferase) domain 1 99 287 - -
Gso20g0069 364 SUPERFAMILY Protein kinase-like (PK-like) 15 314 IPR011009 -
Gso20g0069 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Gso20g0069 364 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0069 364 PANTHER SERINE/THREONINE KINASE 14 359 - -
Gso20g0069 364 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Gso20g0069 364 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0069 364 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0069 364 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Gso20g0069 364 CDD STKc_SnRK2-3 22 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0069 Gso-Chr20 856429 860733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0069 22 283 CBL-interacting serine-threonine protein kinases AT5G25110 44.891 1.36e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gso20g0069 Pkinase 4.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0069 K14498 - gmx:100804702 703.745