Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0051 ATGGCAACCAAACTAGTCATCTTCATCAGGACTTTTAGAACCCCTTACTGGTCTCTTGTCACCATGGATTCAGAAGTACTTAACTTATTAGCCCTTATCTTGCCCTTTTTACTCTTCGTTATTGTGGCACTGAAAATAGGAAGAAGAAATCTCAAGAAATCTGAGTCAACTCCAAAAATACCCCCAGGACCATGGAAGCTACCTATCATAGGGAATATACTCCATCTTGTTACATCTACACCACACCGAAAATTAAGAGACTTGGCCAAAATATATGGACCCTTGATGCATCTCCAACTTGGGGAGCTCTTCATAATCGTTGTTTCCTCAGCAGAGTATGCTAAGGAGATAATGAAAACCCATGATGTCATCTTTGCACAAAGGCCTCATAGTCTTGCTTCAGATATATTATCCTATGAATCCACAAATATTATTTCGGCACCTTACGGACATTATTGGAGACAGCTACGAAAAATATGCACTGTGGAGCTTTTCACTCAAAAACGTGTCAATTCATTCAAGCCAATAAGAGAAGAGGAGCTCGGCAATCTTGTCAAAATGATTGATTCCCATGGAGGGTCTTCTTCCATCAACCTCACTGAAGCAGTACTTCTGTCAATATATAACATCATTTCAAGAGCTGCGTTTGGCATGAAATGCAAAGACCAAGAAGAATTCATATCCGTGGTAAAAGAAGCCATAACAATTGGAGCAGGTTTTCACATAGGAGATTTGTTTCCTTCTGCTAAATGGCTTCAACTTGTTAGTGGTTTGAGGCCTAAGCTTGATATAATACATGAAAAAATTGACCGGATACTAGGAGACATCATCAATGAACACAAAGCAGCAAAGTCAAAAGCCAGAGAAGGCCAGGATGAAGCAGAGGAAGATTTGGTGGATGTTCTCCTAAAATTCAAGGATGGTAATGATAGAAACCAGGACATTTGTTTAACTACTAACAATATCAAGGCTATAATCCTGGACATCTTTGGTGCTGGAGGTGAGACATCAGCAACTACCATAAATTGGGCAATGGCAGAGATGATAAAGAATCCAAGAGCAATGAATAAAGCACAACTTGAAGTAAGAGAGGTATTCGACATGAAAGGAATGGTTGATGAAATTTGCATTGATCAACTCAAATATTTGAAATCAGTTGTCAAAGAGACCCTAAGGTTACACCCACCAGCTCCTCTTTTACTTCCAAGAGAATGTGGACAGACATGTGAGATTCATGGGTATCATATACCTGGCAAAAGTAAGGTAATTGTAAATGCCTGGACAATTGGAAGAGATCCAAACTATTGGACTGAAGCAGAGAGATTTCATCCAGAGAGATTCTTTGATAGTTCTATTGACTACAAAGGGACTAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCTGGCATCACACTTGGTTTGATAAATGTTGAGCTGACACTTGCATTTTTGTTGTATCACTTTGATTGGAAGCTTCCAAATGGAATGAAAAGTGAGGACTTGGACATGACTGAGAAATTTGGAGTGACTGTTAGAAGAAAAGATGACCTATACTTGATACCTGTCACTTCTCGTCCTTTTCTGGGAACTGGTGCAGAGAAATAA 1617 0.3933 MATKLVIFIRTFRTPYWSLVTMDSEVLNLLALILPFLLFVIVALKIGRRNLKKSESTPKIPPGPWKLPIIGNILHLVTSTPHRKLRDLAKIYGPLMHLQLGELFIIVVSSAEYAKEIMKTHDVIFAQRPHSLASDILSYESTNIISAPYGHYWRQLRKICTVELFTQKRVNSFKPIREEELGNLVKMIDSHGGSSSINLTEAVLLSIYNIISRAAFGMKCKDQEEFISVVKEAITIGAGFHIGDLFPSAKWLQLVSGLRPKLDIIHEKIDRILGDIINEHKAAKSKAREGQDEAEEDLVDVLLKFKDGNDRNQDICLTTNNIKAIILDIFGAGGETSATTINWAMAEMIKNPRAMNKAQLEVREVFDMKGMVDEICIDQLKYLKSVVKETLRLHPPAPLLLPRECGQTCEIHGYHIPGKSKVIVNAWTIGRDPNYWTEAERFHPERFFDSSIDYKGTNFEYIPFGAGRRICPGITLGLINVELTLAFLLYHFDWKLPNGMKSEDLDMTEKFGVTVRRKDDLYLIPVTSRPFLGTGAEK* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0051 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Gso20g0051 538 Gene3D Cytochrome P450 46 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 PANTHER CYTOCHROME P450 71B11-RELATED 31 529 - -
Gso20g0051 538 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 31 529 - -
Gso20g0051 538 SUPERFAMILY Cytochrome P450 61 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 Coils Coil 277 297 - -
Gso20g0051 538 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 PRINTS E-class P450 group I signature 113 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0051 538 Pfam Cytochrome P450 61 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0051 Gso-Chr20 687525 690320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0051 28 526 Cytochrome P450 AT3G26300 41.373 9.35e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0051 - - gmx:100814157 1063.91