Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0032 ATGTCAGAATCAAACGCAATTGCAAATGGTTTGGCTGGTGCAGGTGGTGGAATTATTGCTCAAATCATAACTTATCCTCTTCAAACGGTAAACACGCGCCAGCAAACTGAGAGAACACTCAAGAGGAACAAGCAAAGTTTGCCCTCCAACTCAACCACTGCTCCTGGCACTCTTCTTCAGATCTTTCAGGTCATTGGAACTGAGGGTTGGGGTGGACTCTATAGTGGCCTCAAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGAATTTACTACTATTTCTATCAAGTTTTTAAGAACAAGGCAGTTGCCATTGCAGCTGCACGGATGGTGAAAGGGCGTGGAGATGGTACTGTTGGGATGTTTGGTTGGCTTGTTGTGGCTGCCATTGCTGGGTCCTTGAATGTGTTGTTCACAAACCCAATATGGGTTTTGGTGACTCGGATGCAGACTCATACTCAAGCACAAAGGAAAATCATGGACGAAAAGAAAGAAGCTTTAAGGAGGGCTGCTTCTGAAAGCACCATAGCAGACTCAACATTACAAGACAAATTGTCAGAACTCGATTCTATAAAACCTCGGCCATATGGAACTATACATGCGGCTAACGAAGTCTACAACGAAGCGGGTATAGTTGGATTTTGGAAGGGTGTCATCCCTGCCCTTATTATGGTATGCAATCCATCAATTCAGTTTATGATTTACGAGAGCTCATTAAAGCATCTAAGGGCAAAACGCGCTGCTAAGAAGCAAGGGAATACAAGTATATCTGCTTTAGAGGTCTTTTTGGTGGGAGCAATAGCAAAACTTGGAGCTACTGTCTCAACATATCCATTACTAGTTGTCAAGTCAAGGCTTCAAGCGAAACAGGAGATTGGTGGAAGTAGCTCGTATAGATACTCAGGTACTTTTGATGCGGTACTTAAAATGATACGTTATGAAGGACTACCTGGCTTTTATAAGGGGATGAGCACAAAGATAGTACAAAGTGTTTTTGCAGCTTCTGTTCTATTCATGGTTAAGGAGGAGCTTGTTAAGGCTTTTATGGTTGTGGCAGATAAGAGCAAAAAAGTTGTATCAAATATAAGTAGTTGA 1095 0.4274 MSESNAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKRNKQSLPSNSTTAPGTLLQIFQVIGTEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAIAAARMVKGRGDGTVGMFGWLVVAAIAGSLNVLFTNPIWVLVTRMQTHTQAQRKIMDEKKEALRRAASESTIADSTLQDKLSELDSIKPRPYGTIHAANEVYNEAGIVGFWKGVIPALIMVCNPSIQFMIYESSLKHLRAKRAAKKQGNTSISALEVFLVGAIAKLGATVSTYPLLVVKSRLQAKQEIGGSSSYRYSGTFDAVLKMIRYEGLPGFYKGMSTKIVQSVFAASVLFMVKEELVKAFMVVADKSKKVVSNISS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0032 364 Gene3D Mitochondrial carrier domain 177 363 IPR023395 -
Gso20g0032 364 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 355 IPR044712 GO:0006862|GO:0055085
Gso20g0032 364 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 4 355 - -
Gso20g0032 364 Pfam Mitochondrial carrier protein 4 100 IPR018108 -
Gso20g0032 364 Pfam Mitochondrial carrier protein 119 243 IPR018108 -
Gso20g0032 364 Pfam Mitochondrial carrier protein 256 349 IPR018108 -
Gso20g0032 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 101 IPR018108 -
Gso20g0032 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 256 347 IPR018108 -
Gso20g0032 364 Gene3D Mitochondrial carrier domain 1 170 IPR023395 -
Gso20g0032 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 241 IPR018108 -
Gso20g0032 364 SUPERFAMILY Mitochondrial carrier 5 343 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0032 Gso-Chr20 469929 474463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0032 26 357 Chloroplast and Mitochondria Gene Families AT2G47490 29.429 1.59e-28 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0032 K13354 - gmx:100775304 677.167