Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0028 ATGTCACTCTATGCTTTTACATGTGTGTTCTTCTGTTGGGTTGTGTGGGGATACAGAATGTCTTTTGGTGATGAGCTTCTTCCTTTCTGGGGAAAGCCTGCTATGTCACTTGAGCATGCATATCTTTTCAAGAAGGCATTTTTGGGGGCCTTCCCAAATGCCACAATGTGTGTGTTTGCTGCCATCACTTTGATTCTCATTGCTGGGGCCGTGTTGGGGCACATGAACTTCTATGCTTGGATGCTTCCCTGGCCGTTCTCAACACCCACGCTTGCTCACTTGGTCATCCTTGATGTCCTCTTTTTCCGAAAGCCTTCTGTAATTGGAGCTGTTCAAGGCATGATCACTGGTTTGGTTTGCATAACCCCTGCTGCAGGTGTTGTTCAGGGATGGGCATCACTTATAATGGGACTTCTCTCAGGCTCAATTCCTTGGTTCACCATGATGGTCATCCATAAGAGATCAAAGCTACTGCAGAAGGTTGATGATACTATGGCAGTGTTCCATACTCATGCCATTGCAGAAACCCTAGGAGGACTCCTCACTGGGCTCTTTGCTGATCCAAGACTCAACCGGTTGTTCTATGGACATGATGCTCAATACGTTGTTTTCTTTTATGGTTTCGGTTCCAACAAGCTCAGCACCGGCTTCAGGCAAATGGGAGTCCAAATCCTTGGGATTATCTTTGTTATCTTTGTCAACTTCATTCGGATCTTTTTTCCATTGAGAATTTCTGAAGAGGATATGGAGATAGGTGATGAGGCTGCTCATGGTGAAGAAGCTTATGCAATCTGGGGTCAGGGTGATAAGCTTGAAAACTCAAGTTCAAAGTATGGAAGTTCATTATATAATGATGTTGAAGCTGGTGCCCCCAAGAAGAAGCGTGCTGGCACTGTTCAGATGATGTCCAACTAA 915 0.4525 MSLYAFTCVFFCWVVWGYRMSFGDELLPFWGKPAMSLEHAYLFKKAFLGAFPNATMCVFAAITLILIAGAVLGHMNFYAWMLPWPFSTPTLAHLVILDVLFFRKPSVIGAVQGMITGLVCITPAAGVVQGWASLIMGLLSGSIPWFTMMVIHKRSKLLQKVDDTMAVFHTHAIAETLGGLLTGLFADPRLNRLFYGHDAQYVVFFYGFGSNKLSTGFRQMGVQILGIIFVIFVNFIRIFFPLRISEEDMEIGDEAAHGEEAYAIWGQGDKLENSSSKYGSSLYNDVEAGAPKKKRAGTVQMMSN* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0028 304 Gene3D Ammonium transporter AmtB like domains 91 266 IPR029020 -
Gso20g0028 304 PANTHER AMMONIUM TRANSPORTER MEP2 1 86 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gso20g0028 304 PANTHER AMMONIUM TRANSPORTER MEP2 90 302 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gso20g0028 304 PANTHER AMMONIUM TRANSPORTER 90 302 - -
Gso20g0028 304 PANTHER AMMONIUM TRANSPORTER 1 86 - -
Gso20g0028 304 SUPERFAMILY Ammonium transporter 94 239 - -
Gso20g0028 304 Gene3D Ammonium transporter AmtB like domains 1 90 IPR029020 -
Gso20g0028 304 Pfam Ammonium Transporter Family 96 262 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gso20g0028 304 Pfam Ammonium Transporter Family 2 83 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gso20g0028 304 SUPERFAMILY Ammonium transporter 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0028 Gso-Chr20 423935 426368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0028 97 292 Inorganic Solute Cotransporters AT2G38290 48.780 1.73e-60 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0028 K03320 - gmx:100790774 608.216