Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0026 ATGAATTCCAATATTTGCAATTGGAAACAAAATCAGGTTCTTCCCACAGAGGAAGCAAAGGGGGATGACACTTACCTCTCAGCTTTGACACTATGCTTCAGCCGAATTTTCCCTGCAATCTTGAACGCTGCTGTTGATCTGAATTTGTTTGATATCATAGCCAAGGCAGAGAGTTCATCTTTGTCAGCCTCGGAAATTGCTTCTTTGCTGCTTCCAAATCCACACCCTCAATTGGCTAATAGGCTTGAACGCATATTGCCTGTGTTGGCAAGTTACTCTCTTCTCAATTGCTCCATTCGCACCAATGAAGATGGTGTGAGAGAGAGACTCTATGCTCTCTCACCAATTGGTCAATACTTTGCGTGTGACAACGATGGAGGCTCTTTGGGTCCTCTCTCAAGCTTATTTCATCGTGGATATTTTCACGTCTTGAAGGATGTAAAGGATGCAATTATGGACCCTAACAACAACGACCATTTCCAAAATGTCCATGGAATGCCTCCTTATCAATATATGAAGACAGACGAAGAACTTAATAAACTATTTAACAAAGCGCTAGCTCAAACTGGTCCACCTGCAATGAAAATGCTCCTTAAACTATACAAAGGATTTGAACAAGTATCAACACTGGTTGATGTTGGAGGTGGAGTTGGTGAGACCTTAAAACAGATTATCTTTGACTACCCATCGATCAAAGGAATTAATTTTGATTTGCCTCAAGTGATTCAAGATGCACCACCCCATCCAGGAATAGAACATGTTGAAGGAGATATGTTTGAAAGTGTTCCCAAGGGTGATGCCATTTTACTTAAGCTTGTATGTCACAATTGGTTAGACGAAGACTGTGTAAAGTTTTTAAGGAATTGCCACAAAGCTTTGCCACAACATGGGAAGGTGATTGTTATAGACTATATAATTCCAGAAGTTCCGGATTCAAGCAAAATTTCTATGCAAACTTGTGTTGCTGATAGTCTCATGTTTTTAGTAACAAGTGGAAAGGAAAGAACTGAGAAAGAATTTGAGAGCTTGTGCAGGAATTCTGGATTTTCTGGATTTCATGTTGCATGTAGAGACTCACCGTCGGTTCTATCAGTGGTGGAATTTTATAAATAA 1113 0.3998 MNSNICNWKQNQVLPTEEAKGDDTYLSALTLCFSRIFPAILNAAVDLNLFDIIAKAESSSLSASEIASLLLPNPHPQLANRLERILPVLASYSLLNCSIRTNEDGVRERLYALSPIGQYFACDNDGGSLGPLSSLFHRGYFHVLKDVKDAIMDPNNNDHFQNVHGMPPYQYMKTDEELNKLFNKALAQTGPPAMKMLLKLYKGFEQVSTLVDVGGGVGETLKQIIFDYPSIKGINFDLPQVIQDAPPHPGIEHVEGDMFESVPKGDAILLKLVCHNWLDEDCVKFLRNCHKALPQHGKVIVIDYIIPEVPDSSKISMQTCVADSLMFLVTSGKERTEKEFESLCRNSGFSGFHVACRDSPSVLSVVEFYK* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0026 370 Gene3D Vaccinia Virus protein VP39 179 357 IPR029063 -
Gso20g0026 370 Pfam Dimerisation domain 40 90 IPR012967 GO:0046983
Gso20g0026 370 Gene3D - 36 197 IPR036388 -
Gso20g0026 370 PANTHER O-METHYLTRANSFERASE 5 370 IPR016461 GO:0008168
Gso20g0026 370 PIRSF O-mtase 7 370 IPR016461 GO:0008168
Gso20g0026 370 SUPERFAMILY "Winged helix" DNA-binding domain 24 125 IPR036390 -
Gso20g0026 370 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 5 370 - -
Gso20g0026 370 Pfam O-methyltransferase domain 146 350 IPR001077 GO:0008171
Gso20g0026 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 370 IPR016461 GO:0008168
Gso20g0026 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 140 361 IPR029063 -
Gso20g0026 370 CDD AdoMet_MTases 209 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0026 Gso-Chr20 359240 361811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0026 10 356 Monolignol Biosynthesis Gene Families AT5G54160 46.328 5.37e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0026 - - gmx:100793053 749.969