Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0021 ATGCATCACAACATCTCCAATAATCATTCCTTCATTGTGAACAAATCAGCCACCAAAATGAACTTTTTCTCCCTCACTCACTTCCTCTTGCAACACATCCACATCTTGGAACTCACCATTGCAACCGCAATGTTCATAGCCCTTAGAGCTTGGCGCTCAAAGAGGCACCGTGGCCTACCCATTTGGCCAATCTTTGGAATGCTCCCTTCCCTTCTCTATGGCCTCACAACCAACTTGTATGAATGGCTCAGTGAAGTTCTCATCCGCCAAAATGGTACCTTCACATTCCAAGGCCCGTGGTTCGCTAGCCTCGACTGTGTCCTCACCTCCGACCCTCGCAATCTCGAACATCTCCTCAAAACCAAGTTCTCCTCCTTCCCCAAGGGAAAGTTCTTCAGGTACACGCTTCGTGACCTTCTAGGAAACGGCATATTCAACGCAGACAACGAGACATGGCAGCGACAAAGGAAGACGGCGAGCCTCGAGTTTCACTCCACAATGTTCAGAAACCTAACCGCAGAGTCACTCTTCGAGCTCGTCCACAAAAGACTCTTACCCTTGTTAGAGTCATGTGTGAACAAATCACGTGTCATAGACCTTCAAGATATTTTGTTAAGGCTCACTTTCGACAACGTGTGCATGATAGCGTTTGGTGTTGACCCTGGTTGCTCACAGCCCCACTTGCCAGAGATTCCATTCGCTACAGCATTTGAGGATGCAACAGAAACCTCAATGAGGAGATTCATCACCCCAGTGTGGATGTGGAAGTTCATGAGGTATCTCGATGTTGGTGCTGAAAAGAGGTTGAGGGAGTCAATAGAGAAGGTTGATGAGTTTGCCGAGAGTGTTATTAGGACAAGGAAAAAGGAACTTGCTTTGCAGCATGAGAAATCTGACCTATTAACTGTGTTCATGAGGCTTAAGGATGAGAATGGAATGGCTTATTCAGATAGGTTTTTGAGGGACATTTGTGTGAATTTCATTTTGGCTGGGAGGGACACTTCTTCTGTGGCTTTGAGTTGGTTTTTCTGGCTTTTGCATAAGAATCCTAAAGTGGAGGAGAGGATTTTGGCTGAGATTTGCAGGGTGGTTATGAGACACAGGGAAGGGTTGAAGAAGGAAGAGGTTGCTGGGAATTGTATTGCATTTAGGCCTGAGGAGATAAAGAAGATGGATTATTTGCATGCTGCCCTTTCAGAAGCTCTCAGGTTATATCCTTCTGTTCCTGTGGATCACAAGGAGGTGGTGGAGGATGTGACTTTCCCAGATGGAACAGTGCTACAGAAAGGGACAAAAGTAATGTATTCAATTTACACAATGGGGAGAATGGAAAGCATATGGGGCAAGGACTGCAAGGAATTCAAGCCAGAAAGGTGGCTAAGAGATAATGGACACTTCATGAGTGAGTCTGCTTACAAATTCACTGCCTTCAATGGAGGACCTCGTTTGTGCTTAGGCAAAGATTTTGCATACTATCAAATGAAATATGCTGCAGCCAGCATCATTTTCCGCTACCATGTTAAGGTACTGGAGAACCACCCTGTGGTGCCAAAGCTTGCCTTGACTCTCTACATGAAGCATGGCTTGAAAGTCAACCTTCAAAGGCGCGATGCTTCAGAAATTGAGAAGTACTTCAAAGTTTAG 1644 0.4562 MHHNISNNHSFIVNKSATKMNFFSLTHFLLQHIHILELTIATAMFIALRAWRSKRHRGLPIWPIFGMLPSLLYGLTTNLYEWLSEVLIRQNGTFTFQGPWFASLDCVLTSDPRNLEHLLKTKFSSFPKGKFFRYTLRDLLGNGIFNADNETWQRQRKTASLEFHSTMFRNLTAESLFELVHKRLLPLLESCVNKSRVIDLQDILLRLTFDNVCMIAFGVDPGCSQPHLPEIPFATAFEDATETSMRRFITPVWMWKFMRYLDVGAEKRLRESIEKVDEFAESVIRTRKKELALQHEKSDLLTVFMRLKDENGMAYSDRFLRDICVNFILAGRDTSSVALSWFFWLLHKNPKVEERILAEICRVVMRHREGLKKEEVAGNCIAFRPEEIKKMDYLHAALSEALRLYPSVPVDHKEVVEDVTFPDGTVLQKGTKVMYSIYTMGRMESIWGKDCKEFKPERWLRDNGHFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYAAASIIFRYHVKVLENHPVVPKLALTLYMKHGLKVNLQRRDASEIEKYFKV* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0021 547 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0021 547 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0021 547 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0021 547 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0021 547 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0021 547 Pfam Cytochrome P450 61 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0021 547 PANTHER CYTOCHROME P450 23 538 - -
Gso20g0021 547 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Gso20g0021 547 Gene3D Cytochrome P450 43 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0021 547 PANTHER CYTOCHROME P450 86B1-LIKE 23 538 - -
Gso20g0021 547 SUPERFAMILY Cytochrome P450 49 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0021 547 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0021 547 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0021 547 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0021 547 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0021 Gso-Chr20 263100 266863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0021 28 545 Cytochrome P450 AT5G23190 69.866 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0021 K15402 - gmx:100787593 1117.83