Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0018 ATGAAGAATCTCCACCTCCCCACCGCCGCCGACGCCGAATCCCTCGCCTTCGAACTCCACACCGACGGGGACCAACCCGAATCCGACATCTCCTACGGCCTCAACGTTCGTGCCGACAAAAATCCAGAAGGAAACAACAAAGACGACAGTGATGGTGCTGCCCCACGGCGTCGAGTTCCGCTGGAGGCCACGGCGCTGCAGAAGCTGAAAAGCGACCTGGAGAGGCTGCCGGAGGACCAGGGGATGGAGGAGTTCAAGGATGTCGCCGTCGAGGGCTACGGCGCGGCACTGCTCGCCGGCTATGGCTGGAAGGAAGGAATGGGGATTGGGAGGAACGCCAAGGAGGACGTGAAGGTGGTGGAGATCAAACGGAGAACTGCCAAGGAAGGATTAGGGTTTGTCGGTGATGCTCCTGCGGCGCTCGTTCTGAGCAACAATGAGAAGGACAACAAGAAGAAGGAGAAGAAGGAGAAGGTTGTTAGGATTGTTGGGGGAAGAGATGCTGGGTTGAAGGGTAGTGTTGTGTCTAGGATTGGGGATGATTATCTTGTTTTGGAGCTTTCAAGAAGTGGAGAGAAGGTGAAGGTGAAGGTGAAGGTTGGTGATGTTGCTGAATTGGGTTCTAAGGAGGAAGAGAGGTGTTTGAGGAAATTGAAGGAGTTGAAGACTCAGCGTGAGGATAAAGTGTCAAAGAGTAAGCGCGGTAGGGATGAGGTGGAGGAGAAGAGAGGGGATGTTAATAGGAGAAAGGAGAAGAGAGTTGATGTTGGTAGGAAAGAGGAGAGGAGAGTGGTGGATCATAGGAAGGTTTCCTGGCTTACAAGTCACATTCGTGTTAGGGTGATTAGCCGGGATTTGAAAGGGGGGCGGTTGTATTTGAAGAAGGGGGAGGTTCTGGATGTTGTTGGGCCTACTACTTGTGATATATCTATGGATGAGAACCGGGAGATTGTTCAAGGAGTGTCACAAGATGTTCTCGAGACAGTGATACCGAAACGTGGGGGACCGGTGCTTGTGTTGGCTGGTAAATACAAGGGTGTGTACGGGAGTATGGCAGAGAGGGATTTGGACCAGGAAACTGCCATAGTTAGGGATGCTGATACCCATGAGCTGCTCAATGTGAAACTTGAACAGATTGCAGAGTATATAGGGGACCCAAGCTTATTGGGACATTGA 1176 0.5196 MKNLHLPTAADAESLAFELHTDGDQPESDISYGLNVRADKNPEGNNKDDSDGAAPRRRVPLEATALQKLKSDLERLPEDQGMEEFKDVAVEGYGAALLAGYGWKEGMGIGRNAKEDVKVVEIKRRTAKEGLGFVGDAPAALVLSNNEKDNKKKEKKEKVVRIVGGRDAGLKGSVVSRIGDDYLVLELSRSGEKVKVKVKVGDVAELGSKEEERCLRKLKELKTQREDKVSKSKRGRDEVEEKRGDVNRRKEKRVDVGRKEERRVVDHRKVSWLTSHIRVRVISRDLKGGRLYLKKGEVLDVVGPTTCDISMDENREIVQGVSQDVLETVIPKRGGPVLVLAGKYKGVYGSMAERDLDQETAIVRDADTHELLNVKLEQIAEYIGDPSLLGH* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0018 391 MobiDBLite consensus disorder prediction 225 258 - -
Gso20g0018 391 SMART kow_9 330 357 IPR005824 -
Gso20g0018 391 SMART kow_9 153 180 IPR005824 -
Gso20g0018 391 PANTHER G PATCH AND KOW-CONTAINING 1 389 IPR045166 GO:0000398
Gso20g0018 391 SMART G-patch_5 88 134 IPR000467 GO:0003676
Gso20g0018 391 MobiDBLite consensus disorder prediction 41 56 - -
Gso20g0018 391 MobiDBLite consensus disorder prediction 17 59 - -
Gso20g0018 391 Pfam G-patch domain 77 133 IPR026822 -
Gso20g0018 391 ProSiteProfiles G-patch domain profile. 90 136 IPR000467 GO:0003676
Gso20g0018 391 Gene3D - 276 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0018 Gso-Chr20 239246 240869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0018 267 364 C2H2 Transcription Factor Family AT1G55460 32.653 3.37e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0018 K13101 - gmx:100784934 705.286