Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0013 ATGTCCAACTCTCACGGAGCCACTAACGCCGTCACCACCACCAACCACTCCAACAACAACACAGTTGTCGACCACCACCAGCAACCAACCACCACCGCCCTCGCCGTCAAGAAACCGCCGTCCAAGGACCGCCACAGCAAGGTCGACGGCCGCGGCCGCCGCATTCGCATGCCGATCATCTGCGCCGCGCGCGTCTTCCAGCTCACGCGCGAGCTCGGTCATAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGTCAGGCCGAGCCCTCCATCATCGCCGCCACCGGCACCGGCACCACTCCGGCGAGCTTCTCCACCGTCTCCGACCACAAGCCCCTCCTCCCTCCCCCCACCCCCTTCATCCTCGGCAAACGCATTCGCCCCGACGACGACAACTCCGCCAAAGACGACACCGTCTCGCTCGTCGTTCCCCCCACGCCGCCCTCCCTGTGGGCCCTCCCTCCCCGCCCCGACTTCGGCCAGGTCTGGAGCTTCGCCGCCCCCGAACTCGTGTCGGTGTCGCCGCAGAATTCCTTGTTTCACCACCACCACCACCACCACCACCAGCAGGCCGCCATGGGAGAGGCCTCGGCCGCCAGGCTCGGGAATTACCTCCCCGGCCACCTCAATTTGCTTGCCTCGTTGTCCGGCGGCGGCCACGGGAATTCCGGCCGGCGGGACGACGAGCCTCGCTGA 699 0.6738 MSNSHGATNAVTTTNHSNNNTVVDHHQQPTTTALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSDHKPLLPPPTPFILGKRIRPDDDNSAKDDTVSLVVPPTPPSLWALPPRPDFGQVWSFAAPELVSVSPQNSLFHHHHHHHHQQAAMGEASAARLGNYLPGHLNLLASLSGGGHGNSGRRDDEPR* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0013 232 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 229 - -
Gso20g0013 232 MobiDBLite consensus disorder prediction 38 53 - -
Gso20g0013 232 MobiDBLite consensus disorder prediction 1 35 - -
Gso20g0013 232 Pfam TCP family transcription factor 41 111 IPR017887 -
Gso20g0013 232 ProSiteProfiles TCP domain profile. 41 95 IPR017887 -
Gso20g0013 232 MobiDBLite consensus disorder prediction 1 53 - -
Gso20g0013 232 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 229 IPR005333 GO:0003700
Gso20g0013 232 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0013 Gso-Chr20 181724 183148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0013 17 232 TCP Transcription Factor Family AT5G23280 62.963 3.35e-88 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso20g0013 TCP 1.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0013 K16221 - gmx:100782271 419.468