Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g2093 ATGGTGAAGGAGACCGAATACTATGACGTGCTGGGTGTCAGCCCTACGGCATCCGAAGCCGAGATTAAGAAAGCTTATTACATTAAGGCACGGCAAGTGCATCCAGATAAAAACCCAAATGACCCTCTTGCTGCACAAAATTTTCAGGTTTTAGGTGAGGCTTACCAAGTTCTGAGTGACCCAGCTCAAAGACAAGCTTATGATGCTCATGGAAAATCAGGAATTTCAACTGAAGCAATTATTGATCCTGCAGCAATCTTTGCCATGCTTTTTGGTAGTGAGCTTTTTGAGGAATATATAGGTCAGTTAGCCATGGCATCAATGGCTTCAATGGACATCTTTACTGAAGGAGAACAATTTGATAGTAAAAAGTTGCAAGAGAAAATGAGGGTTGTTCAGAAGGAGAGAGAAGAAAAGCTTGCAGAGATACTGAAAAATAGACTCAACCAATATGTTCAAGGAAACAAAGAGGGTTTTGTTAATGATGCAGAAGCTGAAGTAGCCCGGCTATCTAATGCAGCTTATGGGGTTGATATGTTGAATACCATTGGCTACATATACGCAAGGCAGGCAGCAAAAGAGCTAGGGAAGAAAGCAATTTATTTGGGTGTGCCTTTTATTGCTGAGTGGTTTAGAAACAAAGGGCACTCTATTAAATCTCAAGTTACAGCAGCAACAGGGGCAATTGCTTTAATCCAATTGCAGGAGGATATGAAAAAGCAACTCAGTTCAGAAGGGGACTATACTGAAGAAGAGCTTGAAGAATACATGCAAAATCACAAGAAATTAATGATTGACTCATTGTGGAAGCTTAATGTGGCAGACATTGAAGCCACTCTTTCCCGCGTTTGTCAAATGGTTCTTCAAGACAACGGTGCCAAGAAAGAAGAACTCCGCGCTCGAGCTAAAGGGTTAAAAACTCTTGGTAAAATCTTCCAGAGGGTTAAATCAGCCAATGGAAACGAGAATGAAAGTGTACCAAATAAGGCAGTACACAAGTTGAATGGAAGTGAAACTGGCAATGATACTTCTCCTAGTACATCACCCAAATCTTCAAGTCCTGATTTTTCGTCTCAGAGCCCCTATGTGGAGGCCCCGCGCTTTGCTGGCATGCAATTTGATTATAATTTCCCTAGGCCAACCGCCCCCCCGGGTGCCCAGAGACCTACTTCAACCAGCAAGGATTGA 1188 0.4251 MVKETEYYDVLGVSPTASEAEIKKAYYIKARQVHPDKNPNDPLAAQNFQVLGEAYQVLSDPAQRQAYDAHGKSGISTEAIIDPAAIFAMLFGSELFEEYIGQLAMASMASMDIFTEGEQFDSKKLQEKMRVVQKEREEKLAEILKNRLNQYVQGNKEGFVNDAEAEVARLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHSIKSQVTAATGAIALIQLQEDMKKQLSSEGDYTEEELEEYMQNHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNGAKKEELRARAKGLKTLGKIFQRVKSANGNENESVPNKAVHKLNGSETGNDTSPSTSPKSSSPDFSSQSPYVEAPRFAGMQFDYNFPRPTAPPGAQRPTSTSKD* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g2093 395 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 365 - -
Gso1g2093 395 MobiDBLite consensus disorder prediction 319 395 - -
Gso1g2093 395 CDD DnaJ 6 60 IPR001623 -
Gso1g2093 395 Coils Coil 122 142 - -
Gso1g2093 395 Coils Coil 239 259 - -
Gso1g2093 395 MobiDBLite consensus disorder prediction 319 360 - -
Gso1g2093 395 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Gso1g2093 395 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Gso1g2093 395 Pfam DnaJ domain 6 68 IPR001623 -
Gso1g2093 395 PRINTS DnaJ domain signature 8 26 IPR001623 -
Gso1g2093 395 PRINTS DnaJ domain signature 26 41 IPR001623 -
Gso1g2093 395 PRINTS DnaJ domain signature 43 63 IPR001623 -
Gso1g2093 395 PRINTS DnaJ domain signature 63 82 IPR001623 -
Gso1g2093 395 Pfam X-domain of DnaJ-containing 133 324 IPR026894 -
Gso1g2093 395 Gene3D DnaJ domain 1 84 IPR036869 -
Gso1g2093 395 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Gso1g2093 395 SMART dnaj_3 5 63 IPR001623 -
Gso1g2093 395 PANTHER CHAPERONE PROTEIN DNAJ 10-LIKE ISOFORM X1 1 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g2093 Gso-Chr1 57277791 57306131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g2093 7 70 C2H2 Transcription Factor Family AT1G74250 43.478 6.64e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g2093 - - gmx:100780905 744.191