Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g2084 ATGTATATATATAGCACAGGACTTCAACACCGTGTAGCCAGAGAGAAGTTAAAGATGGGCATCACGTACATGTGCGCTTTAATATTATTGTCATTATTGCTTCATTCATTTATGTTCATTGCGGCAGATCAACGGGTGGCCGGATTGGAAACTATCATAGCAAGTGGCCACGTGCACGGGGGTAATTTTTATGGCTCTCCTCCACCACCTCCCCCCGAGTGTCACCCACCCCCTCCAATGTGTCCTCCACCTCCACCTCCGCCACCCGTACGGCTGGAGAGAGCTCGCAAAGCGCTTATCAAATTCACTCGTTTGGTGGATGACCCAAATGGATATACGAGTAACTGGAAGGAGGGTAGAGACACTTGTGAGTTCAGGGGGGTGCGATGTGCAAAATATCCAGACGGACAGCAAGCAGTTGCGGGATTAGACCTGAATGGAGCTGGCCTCTCTGGAAAAAAATGTACAGCGCTCATGCTCACCGGCATCTTGGACAGCATACCCGAGCTCACTTTCTTCCACGTCAACTCCAACAACTTCAGCGGTGCCATCCCAACCGACATCACCAAGTACAAATTTTTCTTCGAGCTAGATCTCAGTAACAACAAACTGGAGGGTGAGTTCCCGAAGGAAGTGCTCCAGCCCAAGCCCAAGGACCAGCAGCTGGTGTTCCTTGACCTCAGGTTCAACAGTCTCTGCGGCCCAATTCCACCGCAGCTCTTTGACTTGGATCTGGATGTGATTTTCATCAACAACAATAAGTTCAGTGGCCATCTCCCCGATAACTTTGGGTCCACACCGGCCAGGTACCTCACTTTTGCCAACAACCAGCTCACGGGCCCAATCCCGGCAAGCATTGGCAAAGCCTCCAAAACCCTCACCGAAGTCCTCTTCTTGGGCAATCACTTCCAGGGTTGCTTGCCCTACCAAATTGGCTACCTCGATAAGGCTACCGTCTTTGATGTCAGCAAAAACTCCTTAACGGGTCCCATCCCACACTCCTTTGCCTGCCTGCAAAGCATCCAGTACCTCAACTTGGACCGCAACCAGTTTTACGGAGAGGTTCCTGAGATGCTGTGTCTTCTCCCTGGCCTCCGCAACAATGGGAACCTCTCCTTATCCGACAACTATTTCACTCAGGTTGGCCCTGCATGCAGGAACCTTATCAAAACCAATGTGCTGGACGTCAGCTACAATTGCATTCTGGGGCTTCCAAATCAAAGGCCGCACGGACAATGCACAGAATTCTTCTCCAAGATCAAGCCCTGCCCAAATCCAAAGTATCTCCATTACGTCCCTTGTAAAGGATACTACCCGCACACCCACCCCGCCGCCACTGCCACTCCTCCGCTCACTTACAACTCTCTCAACCCCCATCATCTTCATCGCTAG 1392 0.5122 MYIYSTGLQHRVAREKLKMGITYMCALILLSLLLHSFMFIAADQRVAGLETIIASGHVHGGNFYGSPPPPPPECHPPPPMCPPPPPPPPVRLERARKALIKFTRLVDDPNGYTSNWKEGRDTCEFRGVRCAKYPDGQQAVAGLDLNGAGLSGKKCTALMLTGILDSIPELTFFHVNSNNFSGAIPTDITKYKFFFELDLSNNKLEGEFPKEVLQPKPKDQQLVFLDLRFNSLCGPIPPQLFDLDLDVIFINNNKFSGHLPDNFGSTPARYLTFANNQLTGPIPASIGKASKTLTEVLFLGNHFQGCLPYQIGYLDKATVFDVSKNSLTGPIPHSFACLQSIQYLNLDRNQFYGEVPEMLCLLPGLRNNGNLSLSDNYFTQVGPACRNLIKTNVLDVSYNCILGLPNQRPHGQCTEFFSKIKPCPNPKYLHYVPCKGYYPHTHPAATATPPLTYNSLNPHHLHR* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g2084 463 SUPERFAMILY L domain-like 94 405 - -
Gso1g2084 463 SUPERFAMILY Formin homology 2 domain (FH2 domain) 67 72 - -
Gso1g2084 463 MobiDBLite consensus disorder prediction 64 84 - -
Gso1g2084 463 Gene3D Ribonuclease Inhibitor 269 431 IPR032675 -
Gso1g2084 463 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 446 - -
Gso1g2084 463 Pfam Leucine rich repeat N-terminal domain 95 130 IPR013210 -
Gso1g2084 463 Gene3D Ribonuclease Inhibitor 92 268 IPR032675 -
Gso1g2084 463 PANTHER BNAC05G26270D PROTEIN 26 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g2084 Gso-Chr1 57173792 57175600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g2084 91 423 Trihelix Transcription Factor Family AT1G12040 39.763 2.96e-72 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g2084 - - gmx:100781083 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g2084 1 57173792 57175600 Gso11g0005 11 40299 42274 GST