Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g2072 ATGGGGCACTCCAATGTGTGGAATTCTCACCCTAAGAACTACGGACCTGGTTCTCGCACTTGCCGTGTGTGTGGGAATCCTCATGGATTGATCAGGAAATATGGGCTTATGTGTTGCAGGCAGTGCTTCCGAAGCAATGCCAAGGAAATTGGCTTCATCAAGTATCGGTGA 171 0.4912 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR* 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g2072 56 Gene3D 30s Ribosomal Protein S14; Chain N 1 56 IPR043140 -
Gso1g2072 56 PANTHER 40S RIBOSOMAL PROTEIN S29 1 54 - -
Gso1g2072 56 PANTHER 40S RIBOSOMAL PROTEIN S29 1 54 IPR039744 GO:0003735|GO:0008270
Gso1g2072 56 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 13 49 - -
Gso1g2072 56 Pfam Ribosomal protein S14p/S29e 7 56 IPR001209 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g2072 Gso-Chr1 57094430 57095768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g2072 1 56 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.857 1.36e-34 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g2072 K02980 - gmx:100817876 131.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g2072 1 57094430 57095768 Gso11g0013 11 81645 83524 GST
Gso1g2072 1 57094430 57095768 Gso20g1056 20 40289299 40290452 PCT
Gso1g2072 1 57094430 57095768 Gso10g2300 10 50053324 50054636 PCT
Gso20g1056 20 40289299 40290452 Gso1g2072 1 57094430 57095768 PCT
Gso10g2300 10 50053324 50054636 Gso1g2072 1 57094430 57095768 PCT