Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g2066 ATGAGGGGCGGTGAGGAGCGATCGACAGGGATTCGAAAGAAGGGAAGCGGAGTGAGACAATGGCTGGTCCTGGACGGCAGAGGAGAGACGGAGGTGGTGGAGGCCGGGAAGCACGCCATCATGAGGAGGACGGGACTCCCCGCGCGTGACCTGCGTATATTGGACCCTCTCTTGTCATACCCTTCTACCCTTCTGGGTCGTGAGAGGGCCATCGTCATCAACTTGGAGCACATCAAGGCCATCATCACCGCCCACGAGGTCCTCCTCCTCAACTCTCGCGACCCCTCCGTCACCCCCTTCCTTCAGGAGCTCCAGGCCAGGATCCTCCGCCACCACCACCAGACTCTGGCCGATGCCAACCCCAACCCTGACGACGCCATCAAGATTCTCCCCTTCGAGTTCGTAGCCCTTGAGGCCTGTCTGGAGGCCGCTTGTAGCGTCTTGGAAAACGAGGCTAAGACTTTGGAGCAGGAGGCTCATCCGGCCTTGGACAAGCTCACCTCCAAGATCAGTACTCTCAATTTGGAACGCGTTCGTCAAATTAAGAGCCGATTAGTCGCCATCACTGGCCGTGTTCAGAAGGTCAGGGACGAATTGGAGCACCTGCTCGACGACGACGATGATATGGCTGAGATGTATCTCTCTGAAAAGCTAGCTGAACAAGATGACTTGGAGAAGGCGGAGGATACCTCTTCTGCCGACGATGTTGATGATCACATTGACAGGACCGCTCCTGAAATATCGTTGGACAATGTTGTTGGTAGGGACAGCCATGGAACTCGCGATAGCGCCACCTACAGCGCCGTCACCAAGCAACTTGATGTCGAGGAGCTTGAGATGCTCTTGGAGGCTTACTTTGTGCAGATTGATGGCACCTTGAACAAGCTCTCTACGCTGAGGGAGTACGTTGATGACACAGAGGATTACATCAACATCATGCTGGATGACAAACAGAACCATCTCCTCCAAATGGGAGTCATGTTGACCACAGCAACTCTGGTAGTGAGTGCCTTTGTTGTTGTGGCCGGTATTTTTGGCATGAATATTCACATTGAGCTATTTGATGACCAGAAAGCTGGGATGACACAATTCCTCTGGACTGTTGGTGGTAGCACTGCAGGGACCATATTCTTGTATGTGGTTGCCATTGCCTGGTGTAAGCACAAACGCTTGCTAGAGTGA 1182 0.5364 MRGGEERSTGIRKKGSGVRQWLVLDGRGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFLQELQARILRHHHQTLADANPNPDDAIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLSEKLAEQDDLEKAEDTSSADDVDDHIDRTAPEISLDNVVGRDSHGTRDSATYSAVTKQLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDDQKAGMTQFLWTVGGSTAGTIFLYVVAIAWCKHKRLLE* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g2066 393 PANTHER - 9 118 - -
Gso1g2066 393 PANTHER - 125 392 - -
Gso1g2066 393 MobiDBLite consensus disorder prediction 218 238 - -
Gso1g2066 393 Coils Coil 138 158 - -
Gso1g2066 393 CDD Mrs2_Mfm1p-like 21 391 IPR039204 -
Gso1g2066 393 Gene3D Magnesium transport protein CorA, transmembrane region 95 321 - -
Gso1g2066 393 Gene3D - 7 92 - -
Gso1g2066 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 9 118 IPR039204 -
Gso1g2066 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 125 392 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g2066 Gso-Chr1 57046016 57048760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g2066 21 393 MRS2 Gene Family AT3G19640 63.927 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g2066 - - gmx:100819578 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g2066 1 57046016 57048760 Gso11g0020 11 125183 127531 GST