Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g2064 TTCGAGAAAGTGTGCGCCGACCTTGTTCGTGGTGCCAAGGACAAGCGCCTCAGGGTGAAGGGACCTGTTAGGATGCCAACTAAAGTCCTTAACATCACCACCAGGAAGTCCCCATGTGGTGAAGGCACCAACACATGGGACAGATTTGAGCTGCGTGTGCACAAGAGAGTTATTGATCTCCACAGTTCCCCAGATGTGGTTAAGCAAATTACCTCAATCACAATTGAACCTGGTGTCGAGGTCGAGGTCACCATTGCAGATGCTTGA 267 0.5056 FEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLHSSPDVVKQITSITIEPGVEVEVTIADA* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g2064 88 Gene3D Ribosomal protein S10 domain 1 87 IPR036838 -
Gso1g2064 88 PANTHER RIBOSOMAL PROTEIN S10-RELATED 2 87 - -
Gso1g2064 88 PRINTS Ribosomal protein S10 family signature 23 38 IPR001848 GO:0003735|GO:0005840|GO:0006412
Gso1g2064 88 PRINTS Ribosomal protein S10 family signature 45 59 IPR001848 GO:0003735|GO:0005840|GO:0006412
Gso1g2064 88 Hamap 30S ribosomal protein S10 [rpsJ]. 1 85 IPR001848 GO:0003735|GO:0005840|GO:0006412
Gso1g2064 88 ProSitePatterns Ribosomal protein S10 signature. 12 27 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gso1g2064 88 SUPERFAMILY Ribosomal protein S10 2 85 IPR036838 -
Gso1g2064 88 TIGRFAM uS10_euk_arch: ribosomal protein uS10 2 85 IPR005729 GO:0003735|GO:0006412|GO:0015935
Gso1g2064 88 Pfam Ribosomal protein S10p/S20e 2 84 IPR027486 -
Gso1g2064 88 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 2 87 IPR001848 GO:0003735|GO:0005840|GO:0006412
Gso1g2064 88 SMART Ribosomal_S10_2 2 84 IPR027486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g2064 Gso-Chr1 57042030 57043200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g2064 1 88 Cytoplasmic Ribosomal Protein Gene Family AT3G47370 93.182 1.45e-56 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g2064 K02969 - gmx:100803623 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g2064 1 57042030 57043200 Gso11g0021 11 129074 130253 GST