Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g2043 ATGGCTTGGAGCGGTACCAACACCAACACCAACACCAAACACATAGTCTCACAGATTCCTCCCTACATATATGTCTATAATGATGGCTCCATCGAACGTCCCATAGACATCCCAAGAACTCCTCCCTCACTTGAGGACCCTGCAACAGGTGTCGCTTCCAAAGACATTCTCTTCTCAAAGAACCCTTTCCTCTTTGCAAGACTTTTCCTTCCAAAACTAACAACTCCACCACCCAACCAAAAAATCCCCATTTTGGTCTACTCCCATGGCGGTGCCTTCTGCTTTGAATCAGCATTTGCAGCGCACCACACCAAATACTGCAACCTAATAGCTTCCCAGGCAAATGTTATCATTGTTTCCGTAGAGCATAGGAAAGCTCCTGAGCATTTTCTCCCTGCAGCTTATAATGATTCTTGGGCTGCTCTCAAATGGGTTGCATCCCATTCCCATGCCACCAACAGCAACAGCGACACGTGGCTCATCAATCATGGTGATTTCAGCAAAATATTTATCGGGGGTGATAGCAGCGGTGCCAATATTGTTCATAACCTGGCCATGCGTGCTGGGGTTGAAGCTTTGCCCGGCGGTGTAAAAGTTTACGGTGCTTATCTTAACCACCCTTACTTCTGGGGTTCAAAGCCAATTGGGTCTGAAGCTGTTATAGGATTTGAAGAGACCCCTCAGTCATTGATTTGGAACTTTGCGTACCCTGATGCACCTGGTGGCTTAGATAACCCCATGATCAATCCATTGGCTCCTGGGGCACCCAGCTTGGCTCAACTTGGCTGTTCTAAGATGCTTCTTACTGTTGCCGGTAAGGATCACCTACTCTTCAGGGACAGAACTCTGTTGTACTATAAGGCTGTCAAGGAGAGTGGCTGGAAAGGCCAAGTGGAACTCTTTGAAGAGGAACAAGAGGATCATGTTTATCACATGTTTAATATGGAAACTCACCAAGCCAAAAGATTGATAACAATCGTCGCTAATTTTCTTCGCCAGTGA 1002 0.4661 MAWSGTNTNTNTKHIVSQIPPYIYVYNDGSIERPIDIPRTPPSLEDPATGVASKDILFSKNPFLFARLFLPKLTTPPPNQKIPILVYSHGGAFCFESAFAAHHTKYCNLIASQANVIIVSVEHRKAPEHFLPAAYNDSWAALKWVASHSHATNSNSDTWLINHGDFSKIFIGGDSSGANIVHNLAMRAGVEALPGGVKVYGAYLNHPYFWGSKPIGSEAVIGFEETPQSLIWNFAYPDAPGGLDNPMINPLAPGAPSLAQLGCSKMLLTVAGKDHLLFRDRTLLYYKAVKESGWKGQVELFEEEQEDHVYHMFNMETHQAKRLITIVANFLRQ* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g2043 333 Pfam alpha/beta hydrolase fold 85 312 IPR013094 GO:0016787
Gso1g2043 333 SUPERFAMILY alpha/beta-Hydrolases 31 333 IPR029058 -
Gso1g2043 333 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 9 332 - -
Gso1g2043 333 Coils Coil 328 333 - -
Gso1g2043 333 PANTHER ARYLACETAMIDE DEACETYLASE 9 332 - -
Gso1g2043 333 Gene3D alpha/beta hydrolase 25 333 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g2043 Gso-Chr1 56837348 56838502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g2043 14 332 Carbohydrate Esterase AT3G48690 38.769 3.63e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g2043 - K13258 gmx:100814777 693.73