Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g2022 ATGGAGAAAGCAGAAGAAGAAAGCGTTGATTTGGGTGAAATATGTCTTCGGCCCCTTCAAGTCTCAGACCTGGATGATCTGTTGGTGTGGACCAGTGATGAAAAGGTTGCGGCTTTTTGCTCTTGGGATCCTTACAGCAGCAAAGACGAGGGCATTAACTTCATCCAGAATATAGCAAGCAAGTTTCTGTGGTGCAGAGCAATATGCCTCAAGGATCGTGCTATTGGCTGTATTTCCCTGTCCTCGAATTCAGAGCACGATAAAAGCAGGAGCAGATCCGCGGAACTAGGGTATGTGCTGGGTTCCAAATACTGGGGCAAAGGGGTTGCCACGGTGGCTGTGAAAAAAGTGGTTAAGGCTGCTTTGTCTGAGTTGCCACACTTGGAGAGGATCGAAGCTCTTGTTGATGTGTTCAATGTTGGGTCTCAGAGAGTGCTGGAGAAAGCTGGTTTCCAAAAGGAGGGGATTCTCAGGAAGTATATCTTCCAAAAGGGAAAACCCAGAGATATGGTCATCTTCAGTCTTCTCTCTACTGATCCCAAGCCTTCATTTCCTTAA 558 0.4695 MEKAEEESVDLGEICLRPLQVSDLDDLLVWTSDEKVAAFCSWDPYSSKDEGINFIQNIASKFLWCRAICLKDRAIGCISLSSNSEHDKSRSRSAELGYVLGSKYWGKGVATVAVKKVVKAALSELPHLERIEALVDVFNVGSQRVLEKAGFQKEGILRKYIFQKGKPRDMVIFSLLSTDPKPSFP* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g2022 185 Pfam Acetyltransferase (GNAT) domain 14 152 IPR000182 GO:0016407
Gso1g2022 185 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 176 IPR016181 -
Gso1g2022 185 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 8 180 - -
Gso1g2022 185 Gene3D - 8 182 - -
Gso1g2022 185 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 14 169 IPR000182 GO:0016407
Gso1g2022 185 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g2022 Gso-Chr1 56679747 56680546 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso1g2022 Acetyltransf_3 2.1e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g2022 - - gmx:100527055 361.303