Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1999 ATGGGGGGTGGAGGAGGTGCAATTGGGGTGAGAGGCCTCGATGAAGATGATGATGATGATGTTGGAAAGAATGAAGAAGAAAACAAGTGGCCACCATGGCTTGGGCCACTTCTCCAAACAAGCTTCTTTGTTCAATGCAAAGTCCATGCAGATTCCCACAAAAGTGAATGCAACATGTATTGCTTGGACTGTATGAATGGAGCCCTTTGCTCTACCTGTCTTGCTTCTCACAGAGAACACAGAGCTATTCAGATAAGGAGATCTTCATACCATGATGTAATAAGAGTGTCGGAGATACAGAAATTTCTGGACATAACAGGGGTCCAAACTTACATTATAAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGCAAAGGAGTTACCAACACCTGCCAAGTCTGTGAGCGCAGCCTTCTCGATTCATTCAGCTTCTGTTCCCTTGGTTGTAAGATAGTAGGAACCTCCAAGAAGTTCCGGAAGAAGAAAATGTTAGCTGAGACAGATGGGTCCGATGGTGAAGAATCAATAAATGGCATTAGCAATGAAAGTGGAAGAAACAAAATCCATAGCTTCACGCCGTCAACACCACCACCAACAGTGGTAAATTACAGGACTGCTAAGAGGAGAAAGGGAGTCCCACATAGAGCTCCAATGGGTGGTGCCCTTATTATAAATACAACTAATTAA 705 0.4411 MGGGGGAIGVRGLDEDDDDDVGKNEEENKWPPWLGPLLQTSFFVQCKVHADSHKSECNMYCLDCMNGALCSTCLASHREHRAIQIRRSSYHDVIRVSEIQKFLDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKKFRKKKMLAETDGSDGEESINGISNESGRNKIHSFTPSTPPPTVVNYRTAKRRKGVPHRAPMGGALIINTTN* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1999 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 20 227 - -
Gso1g1999 234 MobiDBLite consensus disorder prediction 179 204 - -
Gso1g1999 234 MobiDBLite consensus disorder prediction 1 30 - -
Gso1g1999 234 MobiDBLite consensus disorder prediction 172 204 - -
Gso1g1999 234 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 20 227 - -
Gso1g1999 234 Pfam PLATZ transcription factor 86 157 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1999 Gso-Chr1 56511055 56514118 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gso1g1999 PLATZ 3.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1999 - - gmx:100796834 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1999 1 56511055 56514118 Gso11g0077 11 627529 630056 GST