Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1976 ATGGGGATTGAAGTGAAACCTGGCAAACCGTGTCCTTATCACGCTGACAATGTGCGAGGGAAGCTTCATGTTACTCAGGCTACTCTAGGCATTGGCTCATCATCGGAGAAAAGCATTCTTCAGTGCTCTTCTGGACACAAAAGTCCAGTTTTCTTGTGTTCATTGCTACCAGATAAGGTTGAGTCATGCCCTTTGAATCTTGAGTTTGACGCAGATGACTTAGTGGCATTCTCGGTTGTTGGCTCACGAAGCATCCACCTTTCAGGTTATTTTGCGGATGACGATGGGGATGATCTTAGGGATGACTATGAATATGATTCATGGGGAGAGGATATTGAAGGAACTGAGTCAGAGGAGTCGTCTGAATATGATAGTGAAGATGGATATGCTGATGACTTTATTGTTGATAGTGATACAGACATGTACCCGTCTTCACCAATCCCAAATAGTGGAGTTGTAATTGAGGAAATAATGGATGATGATAAACCCAAAAATGGAGATGATCCAACTAAGAAATTAAAGAAAAAGAAGCATGTAGCTCAGTTGAAAGAGAAAGACAACAAAAGTTCTGAGCTTCCAATTGTTGCTAAGGGTGATACTGACCTTGTTGTGGAAAGTGAAGATGAAGATGGCTTTCCAATTTCCATTGCAGAGAAAGGTGTGTCTGTCTCTAAGACAGAAGCAGAAATGAAAGGAGAACAAGCACGTAAGAAAACTGAGAAAGCCAACAAGAAGGAAAAAGATGTTGGTCATTCTGCTAGTGTAAAACGAAAAGTTGATAGTGCTGATGAAGATGAGCCTCAGGATGGGAAAAAGAAGAAGAAAAGAAACAAGTTGAAAGATCATATTAAAGGGGGAAGTGATCATGCATCTGACAATAGCAATGAGAAAAAGGTTACTGAACCAGATGAAAAACATGCCGAGGATGTTAAAACTTCAACCAAACTGAGTGATGTTTCTCATGCAAAGGATGAAGATGGTGGAAAGCTATCCAATAACGAGGTCCTTGTTGAGAAGAAAATCAAGAAGAAAAACAAGAAAAAGACCAAAGAGTCTGAAGGGGAAGCTGCCACAAATCAAATTACTACAACTGCTGAAAAACAGAATTTGTCCACAGAGAAAAAGGGGAAGAAACAAACTGAAACCAAGCCATCACAAGTGAGAACTTTTCCAAATGGATTGATTATAGAGGAGGTGTTTATGGGTAAACCTGATGGCAAAAAAGCTGCTCCTGGAAAGAAGGTTAGTGTTAAATATATTGGCAAAATGCAAAAAGATGGGAAAATATTTGACTCAAATGTGGGAAGAGCACCCTTTAAATTTCGCCTGGGTGTAGGACAAGTCATCAAAGGGTGGGAGGTTGGGATCAATGGGATGAGAATTGGGGACAAACGAAGGATCACAATTCCACCGTCTATGGGATACGCGGACAAACGCGTTGGCAGTATACCACCAAGTTCGTGGCTTGTATTTGATGTGGAGTTGGTTGATGTTGGTCGCTGA 1503 0.4098 MGIEVKPGKPCPYHADNVRGKLHVTQATLGIGSSSEKSILQCSSGHKSPVFLCSLLPDKVESCPLNLEFDADDLVAFSVVGSRSIHLSGYFADDDGDDLRDDYEYDSWGEDIEGTESEESSEYDSEDGYADDFIVDSDTDMYPSSPIPNSGVVIEEIMDDDKPKNGDDPTKKLKKKKHVAQLKEKDNKSSELPIVAKGDTDLVVESEDEDGFPISIAEKGVSVSKTEAEMKGEQARKKTEKANKKEKDVGHSASVKRKVDSADEDEPQDGKKKKKRNKLKDHIKGGSDHASDNSNEKKVTEPDEKHAEDVKTSTKLSDVSHAKDEDGGKLSNNEVLVEKKIKKKNKKKTKESEGEAATNQITTTAEKQNLSTEKKGKKQTETKPSQVRTFPNGLIIEEVFMGKPDGKKAAPGKKVSVKYIGKMQKDGKIFDSNVGRAPFKFRLGVGQVIKGWEVGINGMRIGDKRRITIPPSMGYADKRVGSIPPSSWLVFDVELVDVGR* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1976 500 Gene3D Nucleoplasmin core domain 1 97 - -
Gso1g1976 500 PANTHER PEPTIDYLPROLYL ISOMERASE 2 251 - -
Gso1g1976 500 PANTHER PEPTIDYLPROLYL ISOMERASE 263 498 - -
Gso1g1976 500 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 2 251 - -
Gso1g1976 500 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 263 498 - -
Gso1g1976 500 MobiDBLite consensus disorder prediction 102 134 - -
Gso1g1976 500 SUPERFAMILY FKBP-like 346 498 - -
Gso1g1976 500 MobiDBLite consensus disorder prediction 355 369 - -
Gso1g1976 500 Gene3D - 352 499 IPR046357 GO:0003755
Gso1g1976 500 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 412 499 IPR001179 GO:0003755
Gso1g1976 500 MobiDBLite consensus disorder prediction 281 340 - -
Gso1g1976 500 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 407 496 IPR001179 GO:0003755
Gso1g1976 500 Pfam Nucleoplasmin-like domain 2 91 IPR041232 -
Gso1g1976 500 MobiDBLite consensus disorder prediction 224 272 - -
Gso1g1976 500 MobiDBLite consensus disorder prediction 155 192 - -
Gso1g1976 500 MobiDBLite consensus disorder prediction 102 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1976 Gso-Chr1 56330524 56335004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1976 412 496 Calmodulin-binding Proteins AT5G48570 48.315 2.71e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1976 K14826 - gmx:100789099 920.998