Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1914 ATGTCCACCACCGCAACTACAACCTCTGAAGTTAGCAGCAATGAGTGGAAAGTCATACACATGAGCGAGCAAGAGGAGGATCTCATTCGCAGGATGTACAAGCTAGTCGGGGACAAGTGGAATTTGATAGCTGGTCGCATTCCCGGTCGTAAAGCAGAAGAAATAGAGAGATTCTGGATTATGAGACACGGCGATGCTTTTTCTGTTAAAAGAAACGGAAGTAAAACCCAAGACTCGTGA 240 0.4583 MSTTATTTSEVSSNEWKVIHMSEQEEDLIRRMYKLVGDKWNLIAGRIPGRKAEEIERFWIMRHGDAFSVKRNGSKTQDS* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1914 79 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC3 4 72 - -
Gso1g1914 79 SUPERFAMILY Homeodomain-like 22 60 IPR009057 -
Gso1g1914 79 Pfam Myb-like DNA-binding domain 22 60 IPR001005 -
Gso1g1914 79 CDD SANT 21 59 IPR001005 -
Gso1g1914 79 Gene3D - 21 79 - -
Gso1g1914 79 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 4 72 - -
Gso1g1914 79 SMART sant 17 65 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1914 Gso-Chr1 55846556 55850407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1914 21 59 MYB Transcription Factor Family AT5G52600 58.974 1.47e-12 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso1g1914 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1914 K09422 - gmx:100814431 154.836