Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso1g1913 | ATGGAAAGCGACAGGAATTGGGAGCAGAACGCACTCATCAGTGAGCTAATTCAGGGGTTGGAGGTAGCAAGAAAGTTGAAGGAAGACTTGAGTTCAGCCTCTTCGGTTGACGCTAGGGACTCACACTCACTACTGCAGAGGATATTGTCTTCTTATGACAAGGCTTTGCTTTTTCTAAGATGGAATGAATCAGTGTCCATGCAACAACCAACTAAAACTTCTTCACCACAGTCACCACTATCCATTGACAAAACTCCTCTGAGGGAAGACGCTGAAGAAGATCATCAAGAACTTAAACACAATTCGAAGAAAAGAAAGATGATGCCGAAATGGACGGAACATATTAGAGTGAAGATCGAGAACGGCGTTGAAGGACCCCTCGAAGATGGTTACAGCTGGAGAAAATATGGACAAAAAGATATCCTTAGTGCAAAATATCCCAGAAGCTATTATAGGTGCACCTTCCGCAAAACAAAGGGGTGCTTTGCCACAAAGCAAGTGCAGAGATCAGAAGAAGACCACACTATCTTTGACATAACTTACCGAGGAAGTCACACATGTAAGCGAAACGATGCCGTTCTGCCGCCAAAGTCACCAGATTATACACAAGACGGCTCCTTGACTGTCAAAACGGATAACATAACGGCACCTTCCGCTTCGTTTGGATGCATGGCGCAAGATAACTACCACGACTTATTTCCTTCTTTGGTCTTAGAGAATGATCCATTTTTTAGCACCCTTTCCCAAACATCCTCGTTATCTGCAAACACACCTGAATCAAATTATTTTGTGTCTCCGACTTTCCTCGAACATGAATTCGATGGGGTCTGTAACAAGCCCTGCCCTGATTCTGAACTTGCCCGGCTGGTTTCAGCTGATACATCAATCACCAGTTCTCCAATTTTCGACTTTAATTTCTCGCTCGATGCAGTGGGAATTGATTATCCAAATTTCCCCTTCAATATATGA | 969 | 0.4365 | MESDRNWEQNALISELIQGLEVARKLKEDLSSASSVDARDSHSLLQRILSSYDKALLFLRWNESVSMQQPTKTSSPQSPLSIDKTPLREDAEEDHQELKHNSKKRKMMPKWTEHIRVKIENGVEGPLEDGYSWRKYGQKDILSAKYPRSYYRCTFRKTKGCFATKQVQRSEEDHTIFDITYRGSHTCKRNDAVLPPKSPDYTQDGSLTVKTDNITAPSASFGCMAQDNYHDLFPSLVLENDPFFSTLSQTSSLSANTPESNYFVSPTFLEHEFDGVCNKPCPDSELARLVSADTSITSSPIFDFNFSLDAVGIDYPNFPFNI* | 323 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso1g1913 | 322 | SUPERFAMILY | WRKY DNA-binding domain | 126 | 189 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso1g1913 | 322 | Pfam | WRKY DNA -binding domain | 128 | 188 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso1g1913 | 322 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 1 | 321 | IPR044810 | GO:0003700 | |
Gso1g1913 | 322 | SMART | WRKY_cls | 127 | 189 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso1g1913 | 322 | MobiDBLite | consensus disorder prediction | 85 | 101 | - | - | |
Gso1g1913 | 322 | PANTHER | WRKY TRANSCRIPTION FACTOR 41-RELATED | 1 | 321 | - | - | |
Gso1g1913 | 322 | MobiDBLite | consensus disorder prediction | 68 | 107 | - | - | |
Gso1g1913 | 322 | Gene3D | WRKY domain | 113 | 189 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso1g1913 | 322 | ProSiteProfiles | WRKY domain profile. | 122 | 185 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso1g1913 | 322 | MobiDBLite | consensus disorder prediction | 68 | 82 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso1g1913 | Gso-Chr1 | 55842036 | 55843963 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso1g1913 | 6 | 204 | WRKY Transcription Factor Family | AT4G23810 | 46.491 | 7.78e-55 | 180 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gso1g1913 | WRKY | 4e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso1g1913 | - | - | gmx:100127370 | 654.44 |