Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1901 ATGGCTTCCAATGCCACATCTAAAAATGCTTGCCCACCGCCAATGAAAGCCACATCAAACGGCGCGTTTCAGGGTGACGATCCTCTTGATTTCGCGCTTCCCCTTGCTATTTTACAGATATGCCTTGTTCTTGTAGTCTCAAGGGGACTGGCATATCTTCTTAAACCTTTAAGGCAACCTAGAGTTATTGCAGAAATCATTGGAGGAATAATTCTCGGGCCATCAGCACTTGGACGGAATAAAAGCTATATGCAGAATGTTTTCCCACCCAGGAGTCTTACAGTATTAGATACTTTAGCAAACATTGGCCTTATATTCTTTCTATTCTTAGCGGGCCTGGAGTTAGATCTTAAATCTCTGCGTCAATCTGGAAATCGAGTTCTTGCTATTGCTATGGCTGGAATAAGCCTACCCTTTGTAATAGGAATTGGTTCATCATTTGTTCTAAAACAAACAATTGCCAAAGGTGCAGATAGTGCAGCATTCCTTGTATTTATGGGTGTTGCTCTGTCCATAACTGCATTCCCCGTATTAGCCCGTATTTTGGCTGAGTTGAAACTTCTAACCACAAATGTTGGCAGAACAGCTATGTCAGCTGCAGCAATTAATGATATAGCTGCCTGGATTCTGCTTGCTCTGGCCGTTGCCTTGTCAGGCCATGACCGATCTCCACTCGTGTCATTGTGGGTCTTCTTAGCCGGGTGTGGTTTTGTCATTTGTGCAATCCTTATTGTCCCTCCAATTTTCAAATGGATGAGCCAACGATGCCATGAAGGTGAACCAGTTGAGGAGGTATACATATGTGCTACATTAGCTGCTGTTCTGGCTGCTGGGTTTGTAACAGATGCTATAGGAATCCATGCCATGTTTGGTGCTTTTGTTGTCGGAATTTTGGTCCCAAGTGATGGACCGTTTGCCAGTGCTCTTGTGGAGAAAGTAGAGGATCTTGTGTCTGGTCTATTTCTTCCACTTTATTTTGTGTCAAGTGGATTGAAGACTAATGTAGCCACCATCAAGGGGGCGCAATCATGGGGTCTTCTGGTTTTTGTTATATTTACAGCTTCGTTTGGGAAGATTCTTGGAACTCTTGTTGTTTCACTTTTCTGTAAAGTACCTTTTAATGAGGCTTTGGTGTTGGGGTTCTTGATGAATTGCAAGGGCTTGGTTGAATTAATAGTCCTCAACATCGGTAAAGATAGAAAGGTTTTGAATGATCAGACTTTTGCCATTATGGTTCTTATGGCTGTCTTTACTACCTTCATCACCACTCCTCTCGTGACTGCTGTGTATAAGCCTGCAAGGAAGGGAAAAATAGTTGATTACAAATATAGAACAATTGGAAGGAAAAATGCAAATAGCCAACTGAGGATTCTTACCTGCTTCCACGGTGCAAGAAATATTCCATCAATGATAAATTTGATTGAGGCTTCAAGAGGAATCCGGAAGGGTGACGCACTTTGTGTGTATGCAATGCACCTTAAAGAATTCTCTGAGAGGTCCTCAACAATATTAATGGTACATAAGGCAAGAAGAAATGGGTTGCCATTTTGGAACAAAGGCCATCATGCAGATTCTAACCATGTTATTGTGGCATTTGAGGCTTACAGGCAACTAAGCCAAGTGTCTATTCGGCCAATGATTGCAATCTCATCTATGAACAACATACATGAAGACATTTGTGCAACTGCTGAGAGGAAGGGTGCCGCAGTCATTATTCTTCCATTTCATAAGCATCAAAGATTGGATGGTTCACTAAATATCACTAGAAATGATTTTCGATGGGTTAACAAAAGGGTACTTGAGCATGCACCATGCTCAGTTGGAATCTTTGTTGATCGTGGGCTTGGTGGTACATCTCATGTCTCTGCAAGTAATGTTTCATATCGTGTTACAGTGCTTTTCTTTGGTGGTGGTGATGATCGTGAAGCCCTTGCTTATGGAACTCGTATGGCTGAGCACCCTGGCATCAGATTGCTGGTTATTCGCTTTGTAGGAGAACCAATGAATGAAGGAGAGATTGTAAGAGTTGATGTGGGTGACTCCACTGGCACCAAATTAATCTCACAGGACGAGGAATTCCTCGATGAATTTAAGGCGAAAATAGCCAATGATGACTCCATCATCTATGAAGAGAAAGTAGTAAAAGATGGTGCAGAAACAGTTGCTATTATCTGTGAGTTGAATAGCTGCAATCTGTTTCTTGTGGGTTCAAGGCCAGCTAGTGAAGTTGCCAGTGCTATGAAAAGAAGTGAATGCCCTGAACTAGGACCTGTTGGTGGTTTGTTGGCATCACAAGATTACCCCACAACAGCATCTGTTTTGGTGATGCAACAGTATCAAAATGGGGCGCCAATAAATTTTACTATCTCAGACTCAGAAATGGAGGAACACGTACCTGATCGGGATTCGGAATCTGCTTAA 2421 0.4242 MASNATSKNACPPPMKATSNGAFQGDDPLDFALPLAILQICLVLVVSRGLAYLLKPLRQPRVIAEIIGGIILGPSALGRNKSYMQNVFPPRSLTVLDTLANIGLIFFLFLAGLELDLKSLRQSGNRVLAIAMAGISLPFVIGIGSSFVLKQTIAKGADSAAFLVFMGVALSITAFPVLARILAELKLLTTNVGRTAMSAAAINDIAAWILLALAVALSGHDRSPLVSLWVFLAGCGFVICAILIVPPIFKWMSQRCHEGEPVEEVYICATLAAVLAAGFVTDAIGIHAMFGAFVVGILVPSDGPFASALVEKVEDLVSGLFLPLYFVSSGLKTNVATIKGAQSWGLLVFVIFTASFGKILGTLVVSLFCKVPFNEALVLGFLMNCKGLVELIVLNIGKDRKVLNDQTFAIMVLMAVFTTFITTPLVTAVYKPARKGKIVDYKYRTIGRKNANSQLRILTCFHGARNIPSMINLIEASRGIRKGDALCVYAMHLKEFSERSSTILMVHKARRNGLPFWNKGHHADSNHVIVAFEAYRQLSQVSIRPMIAISSMNNIHEDICATAERKGAAVIILPFHKHQRLDGSLNITRNDFRWVNKRVLEHAPCSVGIFVDRGLGGTSHVSASNVSYRVTVLFFGGGDDREALAYGTRMAEHPGIRLLVIRFVGEPMNEGEIVRVDVGDSTGTKLISQDEEFLDEFKAKIANDDSIIYEEKVVKDGAETVAIICELNSCNLFLVGSRPASEVASAMKRSECPELGPVGGLLASQDYPTTASVLVMQQYQNGAPINFTISDSEMEEHVPDRDSESA* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1901 806 Gene3D - 490 754 - -
Gso1g1901 806 Gene3D - 35 438 IPR038770 -
Gso1g1901 806 PANTHER CATION/H + ANTIPORTER 7 792 - -
Gso1g1901 806 Pfam Sodium/hydrogen exchanger family 42 427 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso1g1901 806 PANTHER CATION/H(+) ANTIPORTER 18 7 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1901 Gso-Chr1 55725322 55729573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1901 1 804 Antiporter Super Family AT5G41610 69.004 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1901 - - gmx:100810155 1538.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1901 1 55725322 55729573 Gso1g1901 1 55725322 55729573 ECH