Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1885 ATGGGTAGCAAAGGCAAACGCAAAGAGCAAGAATCAATAATAACGAGGGTTATGGCTCACGGAGGTAGATACGTGCAATACAACGTGTACGGAAACTTGTTCGAGGTCTCCTCCAAGTATGTCCCTCCCATTCGCCCTGTCGGTAGAGGCGCATACGGCATCGTTTGTGCTGCTGTTAATTGCGATACGCACGAGGAAGTTGCCATAAAGAAGATTGGTAACGCCTTTGACAACATCATTGACGCTAAACGAACTTTGAGGGAAATCAAGCTCCTTCGCCACATGGACCATGAAAATATAATTGCCATTAGGGATATCATACGACCTCCCAGAAAGGATGCCTTCAATGATGTTTACATTGTTTATGAATTGATGGACACTGATCTTCATCAGATTATTCGTTCTGACCAACCTCTTAACGATGACCACTGTCAGTACTTTTTATATCAGCTGTTACGGGGGCTGAAATATGTGCATTCTGCTAATATCTTGCACCGTGATCTTAAGCCCAGTAATTTGCTTCTCAATTCAAACTGTGACCTTAAAATTGCGGACTTTGGTCTGGCAAGGACAACATCTGAAACGGATTTCATGACGGAGTATGTTGTCACACGATGGTACCGAGCCCCAGAATTGCTTCTTAATTGTTCAGAGTACACCTCCGCGATTGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAACCCTTGTTTCCTGGAAAAGATTATGTTCATCAACTGAGGCTTATAACAGAGTTATTAGGTTCACCTGATGATGCCAGCCTTGGATTTCTCCGAAGTGGAAATGCCAAAAGATATGTTCGACAGCTTCCACAATATAGGAAGCAAAATTTCTCCGCTAGATTCCCAAATATGTCTCCTGAGGCATTGGATCTACTAGAAAAGATGCTTATCTTTGATCCCAACAAACGCATTACAGTTGATGAAGCACTATGTCATCCTTATCTTTCATCACTTCATGACATCAATGATGAACCGGTTGGTCCTGGGCAATTCAATTTTGATTTTGAGCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATCTGGAGGGAATCGGTGAAGTACAATCCAGATCCACCCAGTCAGTAA 1128 0.4291 MGSKGKRKEQESIITRVMAHGGRYVQYNVYGNLFEVSSKYVPPIRPVGRGAYGIVCAAVNCDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENIIAIRDIIRPPRKDAFNDVYIVYELMDTDLHQIIRSDQPLNDDHCQYFLYQLLRGLKYVHSANILHRDLKPSNLLLNSNCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSGNAKRYVRQLPQYRKQNFSARFPNMSPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHDINDEPVGPGQFNFDFEQPTCTEEHIKELIWRESVKYNPDPPSQ* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1885 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 374 - -
Gso1g1885 375 SUPERFAMILY Protein kinase-like (PK-like) 44 335 IPR011009 -
Gso1g1885 375 Gene3D Phosphorylase Kinase; domain 1 24 364 - -
Gso1g1885 375 ProSitePatterns Protein kinases ATP-binding region signature. 47 71 IPR017441 GO:0005524
Gso1g1885 375 ProSiteProfiles Protein kinase domain profile. 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1885 375 CDD STKc_TEY_MAPK 34 370 - -
Gso1g1885 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Gso1g1885 375 ProSitePatterns MAP kinase signature. 76 179 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gso1g1885 375 SMART serkin_6 41 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1885 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 374 - -
Gso1g1885 375 Pfam Protein kinase domain 45 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g1885 375 Gene3D Transferase(Phosphotransferase) domain 1 125 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1885 Gso-Chr1 55583759 55587140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1885 1 370 MAP Kinase Gene Family AT4G01370 81.081 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gso1g1885 Pkinase 5.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1885 - - gmx:100803024 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1885 1 55583759 55587140 Gso1g1885 1 55583759 55587140 ECH