Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1876 ATGTCTTCTGATCACTATACTTTTGACGTTTCTTACCAAAGACATGCAAGCCCAGACAACATGATCTCCTATGATGGAAATGGAAATCTTGTGTTTTTCACTGACCCTCAAGGGAATTTTAACAGTTCTCTTGACCCTTTTCCCCCTTCTTTCTGCTCTTTTTCTTCTCAGGAAAACCCTGTGCAGCCTCTGTCTAATATAAAGGGTGAGTTTAGAAGCTTCTCTTCTTTGTATGGCTCCGAAGTGACGAGTGAGGAATGCCAAATGGGTGTGGATTATACCTATAATCAGCAATTTCTTTCTCAATCTCAAACTTGTCATGGTTCTGAAAGTGCATCAAAGTTAATACATAGGAGCTTCAGCTGTACCTCTTTTGATGGGAAGCCTGGTTTCCCCTTTGAACCTCACCCTGACACTCTCATGGACTTTCAATGCCATGCTTTGAACTCCCCTGAAAACACTTTCTTCGCAGCACAAATGAGGAGAGTGTGCAGTACAGGAGACTTGCAGAACATGAAATCAACAGATATGTCTCAAAAAGGGAGCCCCTTGTTGGAGGAAGCAAACTTCAAAGTAGGGCGTTATAGTGCTGAAGAAAGAAAAGAAAAAATCTCTAAGTACAGAGCCAAGAGAAGCCAGAGGAAGTTCAACAAGATAATTAAGTATGCATGCCGAAAGACACTAGCCGACAATCGAACCCGCATACGTGGCAGATTCGCACGCAACGACGAAATCAGCGAGATTCCGAAAGCTCCTTGCTCAAGTTCAACCACAGAAGAATATGAAGACGAGTTCTGGGTTGAATTCATTGAAGGATTAAATGAGGAGGTCATGGCTTAA 840 0.4262 MSSDHYTFDVSYQRHASPDNMISYDGNGNLVFFTDPQGNFNSSLDPFPPSFCSFSSQENPVQPLSNIKGEFRSFSSLYGSEVTSEECQMGVDYTYNQQFLSQSQTCHGSESASKLIHRSFSCTSFDGKPGFPFEPHPDTLMDFQCHALNSPENTFFAAQMRRVCSTGDLQNMKSTDMSQKGSPLLEEANFKVGRYSAEERKEKISKYRAKRSQRKFNKIIKYACRKTLADNRTRIRGRFARNDEISEIPKAPCSSSTTEEYEDEFWVEFIEGLNEEVMA* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1876 279 Pfam CCT motif 200 242 IPR010402 GO:0005515
Gso1g1876 279 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 40 276 IPR045281 GO:0009909
Gso1g1876 279 PANTHER CCT MOTIF FAMILY PROTEIN 40 276 - -
Gso1g1876 279 ProSiteProfiles CCT domain profile. 200 242 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1876 Gso-Chr1 55499872 55502080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1876 196 247 C2C2-CO-like Transcription Factor Family AT5G24930 46.154 2.98e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso1g1876 CCT 1.1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1876 - - gmx:100798428 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1876 1 55499872 55502080 Gso1g1876 1 55499872 55502080 ECH