Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1856 ATGGCTAGTAACACAAACACCAACAACAGCAACAAGAAGGAGAAAGACCTTGAGTTTTTCTTTGAGGAAGATATCAACGAATTGGGTGCACAACAAATGGATGCTGAAACTGCCAAGTTAGAGAGTGAGAGTAGCAGCAGCGATGACGAGGGAAATGATACAACACGCCGTCACTCTTTCACTTCTCAGCAATGGCCTCAAAGTTACAAAGAGACAACAGATTCTTACACACTTGCCGCAACTCCAAATTTTGAATCAATTCTACGAGTTCCAAGTATTATATATTCCAGTTTTGAAAGTCGTTCAAAGAATAACTTGGACATAGATGGAAAGACTCCTTTTCTCTCTGGTCACGAAGGCATTACTCAATCAACATCGTGGAAGGAAGGTTTAGTGCAAAAACATTTATCTGGTGAATTACCCATTGGTCGTGAGTGCAGCTTTCTTCAAACAGTTTTCAATGCGACTAATGTGATGGCTGGAGTCGGTATTCTGTCTACACCTTATACATTGAAAGAAGCTGGGTGGATGAGCATGGTGTTGATGGTTCTTTTTGCAGTCATTTGTTGTTATACAGCCACCCTTATGAGATATTGCTTTGAAAGCAGAGAAGGAATCACTAGCTATCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGTCGTATTATTGTCTCAATCATATTGTACACTGAATTATATTCATGTTGTGTGGAATTCATCACCTTGGAAGGAGACAACCTCACTGGGCTATTCCCAGGAACATCCTTAGATTTGGGTAGTTTTCGGTTAGACTCTGTGCACTTGTTTGGAATTTTGGCGGCACTTATCATTATCCCCACTGTTTGGTTGAAGGATCTTCGTATAATCTCTATTTTGTCAGCTGGAGGAGTTTTTGCAACACTGTTGATTGTTGTATGTGTGTTTTGTGTTGGGACAATAAATGGTGTTGGATTCCATCACACTGGTCAATTGGTCAATTGGAGTGGCATTCCATTAGCTATTGGTATCCATGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCAAATATTTATCAATCTATGGCAGACAAAAGACAATTTACTAAAGCACTAATAATATGTTTTGTATTGTCTATCACAATATATGGAGGTGTTGCAATCATGGGATTTCTCATGTTTGGTGGTGAGACTTTGTCTCAAATAACATTAAATATGCCACGAGATGCATTTGCTTCCAAGGTTGCATTGTGGACCACGGTAATTAACCCATTCACTAAATATGCTTTGTTGATGAACCCATTGGCGAGAAGTCTCGAAGAGTTGCTACCAGATAGAATCTCAAGTACTTATCGATGTTTCATTCTTCTTAGAACAGCACTTGTTGTATCTACCGTTTGTGCTGCTTTTCTTATTCCTTTTTTTGGGTTTGTGATGGCTTTAATTGGTTCTCTCTTCAGTGTACTTGTGGTAAGCAAACACCTAATCAGTGATAATGCCAAGTTTATGTTTTATGAAAATTGTGGGAAAAAAAGCAACTGCTACACAGGTTGCGTTGAGCGTTGTAATTACTACATTTGGAGTCATTTGTGGGATTCTAGGAACATATTCATCTGTGCAGAATATTGTCAACAGTTACTGAGACCTCTAGCCTTTCGCATTGGATGGTTACGATTGAGTACTGTTAACTCGTTACAAATGTTTACTCATGGCAAGTGCAGCTATTTCAATTATGTGAAAATTACACCTTTATTTATGACCAAGCACACTTTATTTTAA 1758 0.3862 MASNTNTNNSNKKEKDLEFFFEEDINELGAQQMDAETAKLESESSSSDDEGNDTTRRHSFTSQQWPQSYKETTDSYTLAATPNFESILRVPSIIYSSFESRSKNNLDIDGKTPFLSGHEGITQSTSWKEGLVQKHLSGELPIGRECSFLQTVFNATNVMAGVGILSTPYTLKEAGWMSMVLMVLFAVICCYTATLMRYCFESREGITSYPDIGEAAFGKYGRIIVSIILYTELYSCCVEFITLEGDNLTGLFPGTSLDLGSFRLDSVHLFGILAALIIIPTVWLKDLRIISILSAGGVFATLLIVVCVFCVGTINGVGFHHTGQLVNWSGIPLAIGIHGFCFAGHSVFPNIYQSMADKRQFTKALIICFVLSITIYGGVAIMGFLMFGGETLSQITLNMPRDAFASKVALWTTVINPFTKYALLMNPLARSLEELLPDRISSTYRCFILLRTALVVSTVCAAFLIPFFGFVMALIGSLFSVLVVSKHLISDNAKFMFYENCGKKSNCYTGCVERCNYYIWSHLWDSRNIFICAEYCQQLLRPLAFRIGWLRLSTVNSLQMFTHGKCSYFNYVKITPLFMTKHTLF* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1856 585 MobiDBLite consensus disorder prediction 26 68 - -
Gso1g1856 585 MobiDBLite consensus disorder prediction 41 56 - -
Gso1g1856 585 PANTHER AMINO ACID TRANSPORTER AVT1A 38 484 - -
Gso1g1856 585 PANTHER OS05G0424000 PROTEIN-RELATED 38 484 - -
Gso1g1856 585 Pfam Transmembrane amino acid transporter protein 146 482 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1856 Gso-Chr1 55327362 55334364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1856 6 469 Amino Acid or Auxin Permease AAAP Family AT2G41190 62.712 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1856 K15015 - gmx:100816368 942.569