Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1836 ATGGCTTCTGGTTCCGGTAAACCCCGCACTTATCAAATGGTGGTAGCCAAAGCCAATCATCGTAAAACTCGCACTCTTTTATTGCTCAAGGATTATCTGAGGGACGACCTAAGTTCGTGTTCATCCAGCGGTTTCAGATCACTCCCACGTCGACAATGCTGCCTGCAACAACTGCAACCTCGCGCTTCTGCTAAATCGGTTCTGCAGAAAGCTTTAGAGGCACTGTTCAACGCCATCAAATCCCGAAACAAAGGCGGTGTTGGTGTTCTTTCTAGAAGCTTCTTCTGGAAAAAAGCATCCAAGAGAGAGTCCATTTCCACTTGTTCGTTAACCGACGTTGAGATGGAAGGATCAGTAACGACAACCAACACCTGCTCCGTCACGAATTCCGCCAGGGTTGACTCTCGTGGAAAAAAGGATTGGACGAAGGTGAAGGAACAATTTAGTCCTGTATCGGTGTTAGACTGTCCATTATTTGATGATGATGAAGAGTCTACATCTCCTTTCAGTTCCCCATCGCGTTCCACCCTGGAAGGAGCCAAACATATCCAGCAGCGTCGACATTTTAATCGCGTTGACTTAGAGAAAAAGATGTCATGGTCAGAACTACGGGAAGATGAATCAATATACAACTATCCCACAAAACCTTGTCCAGTGTTAGTATCAATTACGAGTACACAAAACGAAAATAATAATCTGTTACATGACAGCGTAGAAAAGAATGCGCTCGACCTTCTCACTCGTGTTAAAAATTCAATTTCATCTGTCTGTTTGAGAATTGAGATGGAGAAGTTGTTGTTTGATTTCTTCAAGCAGAGTATTTGGGAGAATACTGATATTAAAAATTCCATGAAGTGCCATCTTTGCAACGTGGCAGAGGATTGGATACGCGGGCAATCTCATGTACAAGATTTGAGTTTGCAAACACGAAAGGGAAGGGAGATATACGTTAAGGAGATGGACAAGTGTGGGAGTTGGAGAACTTTTGAAGAAGAAATACAAGGCTTGGCTATGGAACTCGAAGTTGAGTTCTCCACTAGGTTGGTCAACGAGCTCGTGGTTGACCTAACCATGTGCTTTTTTTAA 1086 0.4355 MASGSGKPRTYQMVVAKANHRKTRTLLLLKDYLRDDLSSCSSSGFRSLPRRQCCLQQLQPRASAKSVLQKALEALFNAIKSRNKGGVGVLSRSFFWKKASKRESISTCSLTDVEMEGSVTTTNTCSVTNSARVDSRGKKDWTKVKEQFSPVSVLDCPLFDDDEESTSPFSSPSRSTLEGAKHIQQRRHFNRVDLEKKMSWSELREDESIYNYPTKPCPVLVSITSTQNENNNLLHDSVEKNALDLLTRVKNSISSVCLRIEMEKLLFDFFKQSIWENTDIKNSMKCHLCNVAEDWIRGQSHVQDLSLQTRKGREIYVKEMDKCGSWRTFEEEIQGLAMELEVEFSTRLVNELVVDLTMCFF* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1836 361 MobiDBLite consensus disorder prediction 162 181 - -
Gso1g1836 361 PANTHER OS04G0572500 PROTEIN 116 356 - -
Gso1g1836 361 PANTHER OS04G0572500 PROTEIN 8 102 - -
Gso1g1836 361 PANTHER OS04G0572500 PROTEIN 116 356 - -
Gso1g1836 361 PANTHER OS04G0572500 PROTEIN 8 102 - -
Gso1g1836 361 MobiDBLite consensus disorder prediction 164 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1836 Gso-Chr1 55141826 55144316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1836 145 358 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 29.464 5.88e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1836 - - gmx:102659854 663.685