Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1794 ATGTCGGCTTACAAAGACCAGGATCCCCGTCTTCATGGCATCAAAACTAAGATTCGTGTCGTCCCCAATTTCCCCAAATCCGGTCTTATGTTCCTAGACATTACTACTCTATTGCTTGATCCCAAAGCATTTAAGGACACAATAGATTTGTTCGTGGAGCGGTACAAGGGCAAAAACATTTCTGTTGTTGCAGGAATTGAAGCTCGAGGTTTTATTTTTGGTCCCCCCATTGCGCTGGCTATAGGAGCAAAGTTTGTACCATTGAGGAAACCAAAGAAGTTGCCTGGAAAAGTTATTTCTCAAGAATATATTCTGGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCTGTTGAACCTGAACGTGTGGGAGCAGAAGTAGTGGAGTGTGCATGTGTAATTGAATTACCAGAATTGAAGGGTCGTGAACGTTTGAACGGGAAGCCCTTGTGCGTGTTGGTGGAATATGTGGATATATGA 483 0.4348 MSAYKDQDPRLHGIKTKIRVVPNFPKSGLMFLDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEPERVGAEVVECACVIELPELKGRERLNGKPLCVLVEYVDI* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1794 160 CDD PRTases_typeI 48 156 IPR000836 -
Gso1g1794 160 Gene3D - 124 158 IPR029057 -
Gso1g1794 160 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 2 121 - -
Gso1g1794 160 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 122 157 - -
Gso1g1794 160 SUPERFAMILY PRTase-like 12 151 IPR029057 -
Gso1g1794 160 Gene3D - 2 123 IPR029057 -
Gso1g1794 160 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 122 157 - -
Gso1g1794 160 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 2 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1794 Gso-Chr1 54752251 54758030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1794 1 156 PRT Gene Family AT1G27450 64.444 2.92e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1794 K00759 - gmx:100526858 307.375