Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1779 ATGGGAACTGCCATGCCAAACATTGCCCCAGGTCTTATCTTCATCATCGCATGGATTTCCGGGTTAGAGAAAGTCAACTTAAGCAATAAATATAGTCAAGTAAAAATCTTGGGAACATTGCTTTGTGTGTTGGGAGCTCTCACAATGAGCATAATGCAAAGCATTTCTGCTCCTGCAACAGTGAAAAATGACACAGTCGAATTAACACCGCCACCATCTGCTTTTACCTTTGACATACAGAAGATAATCGGTTGCCTCTATCTCGTGGTTGCAGTCTTCATTTTGTCAAGCAACGTTGTCCTGCAGGCTTTTGCTCTAGGAGATTTTCCTGCACCCATGTCCTTGGGTGCAATAACGTCCTTGATTGGGGCGTTCATGACTGCAATTTTTCAGTTTCTTGAAGACCACGAAGTGAAAACCAGTTGGCTGCTTGTGAGGTCTGGAGACTTAATTGGCTTTTTTATTCTGGCAGGAGCTGTGAGTGGAATATGCCTGAGCTTCAATGGGTGGGCACTGAAGAAGAAAGGGCCAGTGTTTGTCTCCATGTTTAGCCCAATTGGTACAGTTTGCTCTGTTATTTTCTCGGTAGTTACCCTAGAAGACACTATTAATATTGGAAGTCTTGAAGGCATGTTTCTCATGTTCACTGGGCTCTACTTAGTTCTTTGGGCCAAAGGGAAAGAAGGACACCCAGATGGAGATGGCTTAGAGAAATCTTGA 720 0.4375 MGTAMPNIAPGLIFIIAWISGLEKVNLSNKYSQVKILGTLLCVLGALTMSIMQSISAPATVKNDTVELTPPPSAFTFDIQKIIGCLYLVVAVFILSSNVVLQAFALGDFPAPMSLGAITSLIGAFMTAIFQFLEDHEVKTSWLLVRSGDLIGFFILAGAVSGICLSFNGWALKKKGPVFVSMFSPIGTVCSVIFSVVTLEDTINIGSLEGMFLMFTGLYLVLWAKGKEGHPDGDGLEKS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1779 239 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 227 - -
Gso1g1779 239 Pfam EamA-like transporter family 83 222 IPR000620 GO:0016020|GO:0016021
Gso1g1779 239 PANTHER WAT1-RELATED PROTEIN 1 238 - -
Gso1g1779 239 PANTHER WAT1-RELATED PROTEIN 1 238 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1779 Gso-Chr1 54585136 54588197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1779 1 238 Nodulin-like Gene Family AT5G47470 57.322 4.73e-91 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1779 - - gmx:100814597 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1779 1 54585136 54588197 Gso5g0508 5 5572004 5578480 PCT
Gso5g0508 5 5572004 5578480 Gso1g1779 1 54585136 54588197 PCT