Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g1762 ATGGGTGCATTCATCTTCCTTTTCCTCTTGTGTGTTTTCTGCTTCCAAAGTAAGGTGACCTATGCTACAAGGTGTGGAGATGCAGGCCCTGAAATCCACTATCCATATCAGATAAAAGGTCAACAGCAGCAGCATAAGTCCCTTCCTGGTTTTGAGCTTCTTTGCAAAGACAACCTCACCACTATCCACTTTCCATCTTATGGTGATTTGGTAGTGAAGTCCATTTCCTATGACACCAAAAACATTCACCTCCTTGACCCCAAAAACTGTGCCCATCATGTCTTTCTCAACCTCAATCTCTCCCTCACACCGTTCCACTATTTTTATGTTCTGAAAAACTACACATACCTCAATTGCTCCACCACCCTTCCACATCCTCTCGTGGAGGTTCCGTGTTTAAGTGCTTCAAGCTATCATGTATACACAGTTGACCCTGCAGTGCCTGTGCCGGGTTCATGTGATGGAGTCAAAACCGTAGCCATTCCTTTTGCATATAGCCCTTATCTCTCAGACAAAAGTCTTGGTCTTAGATTAACATGGCACTTGCGTGAACCTCTAGACAACGAAGCAGCAGTGAACCGGACTAGAGGTTCCTACAAATCGCGTAATATAGTTATAGGCTCTAGCATCTGTGTTTTCGTGATGGCCATGCTATTGCTTATAAGCATGAAGGTTCGTGGTGCCACGAGGAACCTCCATCAGAAAGAAGGACAGTTATTGCAGAGCTAA 729 0.4472 MGAFIFLFLLCVFCFQSKVTYATRCGDAGPEIHYPYQIKGQQQQHKSLPGFELLCKDNLTTIHFPSYGDLVVKSISYDTKNIHLLDPKNCAHHVFLNLNLSLTPFHYFYVLKNYTYLNCSTTLPHPLVEVPCLSASSYHVYTVDPAVPVPGSCDGVKTVAIPFAYSPYLSDKSLGLRLTWHLREPLDNEAAVNRTRGSYKSRNIVIGSSICVFVMAMLLLISMKVRGATRNLHQKEGQLLQS* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g1762 242 Pfam Wall-associated receptor kinase galacturonan-binding 24 86 IPR025287 GO:0030247
Gso1g1762 242 PANTHER PROTEIN, PUTATIVE-RELATED 1 236 - -
Gso1g1762 242 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g1762 Gso-Chr1 54435823 54437877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g1762 16 197 C3H Transcription Factor Family AT2G25410 29.167 4.95e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g1762 - - gmx:100790327 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1762 1 54435823 54437877 Gso11g0312 11 2633183 2634654 GST